RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 TBC1D3KA0A087X1G2 549 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 TBC1D3FA6NER0 549 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-209ENST00000425239 TBC1D3LB9A6J9 549 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 RNF103O00237 685 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 YKT6O15498 198 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 RFPL3O75679 317 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 LETM1O95202 739 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-209ENST00000425239 TBC1D3HP0C7X1 549 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 CDK4P11802 303 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 JUPP14923 745 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 PDGFRAP16234 1089 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 SULT2A1Q06520 285 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 CETN1Q12798 172 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 PDCLQ13371 301 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 INAVAQ3KP66 663 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 TBC1D3GQ6DHY5 549 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 TBC1D3CQ6IPX1 549 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 NAPEPLDQ6IQ20 393 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 IQCHQ86VS3 1027 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 CHSY1Q86X52 802 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 TBC1D3Q8IZP1 549 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-209ENST00000425239 CACTIN-AS1Q8N1I8 211 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 SLC25A45Q8N413 288 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 NELFBQ8WX92 580 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 RFFLQ8WZ73 363 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 MED15Q96RN5 788 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 UBE2TQ9NPD8 197 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-209ENST00000425239 SHROOM3Q8TF72 1996 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 CFAP46Q8IYW2 2715 aa15.43■□□□□ 0.06
ATG4B-209ENST00000425239 A0A1B0GVM2 712 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 TCAF2A6NFQ2 919 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 F5H5T6 163 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 I6L893 689 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-209ENST00000425239 CAPN9O14815 690 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 MCF2LO15068 1137 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 SLC7A4O43246 635 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 APOEP02649 317 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 AFPP02771 609 aaKnown RBP15.42■□□□□ 0.06
ATG4B-209ENST00000425239 GIMD1P0DJR0 217 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 ABCB4P21439 1286 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 PPP1R2P41236 205 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 APBA1Q02410 837 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 CNTN1Q12860 1018 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 AUHQ13825 339 aaKnown RBP15.42■□□□□ 0.06
ATG4B-209ENST00000425239 PROX2Q3B8N5 592 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 OTUD1Q5VV17 481 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-209ENST00000425239 GJB7Q6PEY0 223 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 C14orf80Q86SX3 495 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 TRIM69Q86WT6 500 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 CCDC117Q8IWD4 279 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-209ENST00000425239 DEFB106AQ8N104 65 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 ATP6V0D2Q8N8Y2 350 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 CPXM1Q96SM3 734 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 TRIM62Q9BVG3 475 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 NRSN2Q9GZP1 204 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 PRORYQ9H606 182 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 CAAP1Q9H8G2 361 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 ANLNQ9NQW6 1124 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 TBC1D30Q9Y2I9 924 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 PTPRQQ9UMZ3 2332 aa15.42■□□□□ 0.06
ATG4B-209ENST00000425239 CTSLP07711 333 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 GLI1P08151 1106 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 KRT5P13647 590 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 ARRB1P49407 418 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-209ENST00000425239 CENPCQ03188 943 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 ILKQ13418 452 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 STIM1Q13586 685 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 DLG2Q15700 870 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 HES3Q5TGS1 186 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 TTC39BQ5VTQ0 682 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-209ENST00000425239 RNF219Q5W0B1 726 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-209ENST00000425239 KLHL10Q6JEL2 608 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 ZNF683Q8IZ20 524 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 SH2D3CQ8N5H7 860 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 TMEM145Q8NBT3 493 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 SRRTQ9BXP5 876 aaKnown RBP15.41■□□□□ 0.06
ATG4B-209ENST00000425239 ASNSD1Q9NWL6 643 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 DMTF1Q9Y222 760 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 CA5BQ9Y2D0 317 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 RAI2Q9Y5P3 530 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 HS3ST4Q9Y661 456 aa15.41■□□□□ 0.06
ATG4B-209ENST00000425239 TRIM38O00635 465 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 MED7O43513 233 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 GNA14O95837 355 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 MT-CO1P00395 513 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 CKMT2P17540 419 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 SLC9A1P19634 815 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 ACP1P24666 158 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 GNA15P30679 374 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 MAT2AP31153 395 aaKnown RBP15.4■□□□□ 0.06
ATG4B-209ENST00000425239 CCR1P32246 355 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 NNMTP40261 264 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 STX17P56962 302 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 OVGP1Q12889 678 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 PIP5KL1Q5T9C9 394 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 PRPF39Q86UA1 669 aaKnown RBP15.4■□□□□ 0.06
ATG4B-209ENST00000425239 OXR1Q8N573 874 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 PIP4K2CQ8TBX8 421 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 PSMB7Q99436 277 aa15.4■□□□□ 0.06
ATG4B-209ENST00000425239 PCDHGC3Q9UN70 934 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms