RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 MFN1Q8IWA4 741 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CACNA2D3Q8IZS8 1091 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CPXM2Q8N436 756 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 Q8N9G6 341 aaPredicted RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 SCG3Q8WXD2 468 aaKnown RBP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 CCDC74AQ96AQ1 378 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 ZMYND15Q9H091 742 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 PDRG1Q9NUG6 133 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.55□□□□□ -1.36
SDCBP-203ENST00000424270 OSER1Q9NX31 292 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 MARCH2Q9P0N8 246 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 ARHGAP20Q9P2F6 1191 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 SPASTQ9UBP0 616 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 SCML2Q9UQR0 700 aa6.55□□□□□ -1.36
SDCBP-203ENST00000424270 OTOGQ6ZRI0 2925 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 A0A1W2PQU0 124 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 C9orf172C9J069 976 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 C1QTNF3-AMACRE9PGA6 284 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 SLC7A4O43246 635 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 PLRG1O43660 514 aaKnown RBP6.54□□□□□ -1.36
SDCBP-203ENST00000424270 TBL1XO60907 577 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 PHACTR2O75167 634 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 TACC1O75410 805 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 PCDH8O95206 1070 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 FAM200BP0CF97 657 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 HNRNPA2B1P22626 353 aaKnown RBP6.54□□□□□ -1.36
SDCBP-203ENST00000424270 MZF1P28698 734 aaPredicted RBP6.54□□□□□ -1.36
SDCBP-203ENST00000424270 ETV5P41161 510 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 CSKP41240 450 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 PPM1FP49593 454 aaPredicted RBP6.54□□□□□ -1.36
SDCBP-203ENST00000424270 WNT7BP56706 349 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 MC1RQ01726 317 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 C1orf61Q13536 156 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 CDH18Q13634 790 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 TCEA2Q15560 299 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 DUOXA2Q1HG44 320 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 MAP9Q49MG5 647 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 ACCSLQ4AC99 568 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 PRRT3Q5FWE3 981 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 C9orf64Q5T6V5 341 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 SCARA5Q6ZMJ2 495 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 ACOT1Q86TX2 421 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 DTX1Q86Y01 620 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 DCP2Q8IU60 420 aaKnown RBP6.54□□□□□ -1.36
SDCBP-203ENST00000424270 SLC35F3Q8IY50 421 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 CCDC13Q8IYE1 715 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 CARNMT1Q8N4J0 409 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 ZNF557Q8N988 423 aaPredicted RBP6.54□□□□□ -1.36
SDCBP-203ENST00000424270 CCDC112Q8NEF3 446 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 SLC2A14Q8TDB8 520 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 BTN2A2Q8WVV5 523 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 NKD1Q969G9 470 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 RNF34Q969K3 372 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 IFT43Q96FT9 208 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 NOX5Q96PH1 765 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 SLC13A1Q9BZW2 595 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 IKZF4Q9H2S9 585 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 PCIF1Q9H4Z3 704 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 NMUR1Q9HB89 426 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 DYRK4Q9NR20 520 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 FAM49BQ9NUQ9 324 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 INTS13Q9NVM9 706 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 RRN3Q9NYV6 651 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 APOBEC3BQ9UH17 382 aaKnown RBP6.54□□□□□ -1.36
SDCBP-203ENST00000424270 ERRFI1Q9UJM3 462 aaPredicted RBP6.54□□□□□ -1.36
SDCBP-203ENST00000424270 SLC5A6Q9Y289 635 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 DAAM1Q9Y4D1 1078 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 CSNK1G3Q9Y6M4 447 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 NF1P21359 2839 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 F8P00451 2351 aa6.54□□□□□ -1.36
SDCBP-203ENST00000424270 MYH10P35580 1976 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 FAM92AA1XBS5 289 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 TCP11X1B4DZS4 312 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 M0QYT0 321 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 TPP1O14773 563 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 DUX1O43812 170 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 LDLRP01130 860 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 C4BPAP04003 597 aaKnown RBP6.53□□□□□ -1.36
SDCBP-203ENST00000424270 CSF2P04141 144 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 DLATP10515 647 aaKnown RBP6.53□□□□□ -1.36
SDCBP-203ENST00000424270 NME1P15531 152 aaKnown RBP6.53□□□□□ -1.36
SDCBP-203ENST00000424270 TNNI1P19237 187 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 TCN2P20062 427 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 CCKBRP32239 447 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 LEPRP48357 1165 aaKnown RBP6.53□□□□□ -1.36
SDCBP-203ENST00000424270 NUMBP49757 651 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 SLC12A3P55017 1021 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 ZNF445P59923 1031 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 GTF2BQ00403 316 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 CCDC15Q0P6D6 951 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 CNTN1Q12860 1018 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 PDE1CQ14123 709 aaPredicted RBP6.53□□□□□ -1.36
SDCBP-203ENST00000424270 ELAVL3Q14576 367 aaKnown RBP6.53□□□□□ -1.36
SDCBP-203ENST00000424270 SURF1Q15526 300 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 FAXCQ5TGI0 409 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 DYMQ7RTS9 669 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 ZC3H3Q8IXZ2 948 aaKnown RBP6.53□□□□□ -1.36
SDCBP-203ENST00000424270 NRSN1Q8IZ57 195 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 SLC22A18ASQ8N1D0 253 aa6.53□□□□□ -1.36
SDCBP-203ENST00000424270 IGSF22Q8N9C0 903 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms