RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ARIH2O95376 493 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 C2P06681 752 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 FAM163BP0C2L3 166 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 FAM58BPP0C7Q3 252 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 DPEP1P16444 411 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 ARF4P18085 180 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-204ENST00000424143 NSUN2Q08J23 767 aaKnown RBP eCLIP15.53■□□□□ 0.08
C9orf3-204ENST00000424143 LRRC36Q1X8D7 754 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 KCTD11Q693B1 232 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 NAPRTQ6XQN6 538 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 STRA8Q7Z7C7 330 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 ZNF567Q8N184 647 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 CCDC185Q8N715 623 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 RIN3Q8TB24 985 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 MAPK15Q8TD08 544 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 FCRL3Q96P31 734 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-204ENST00000424143 GCNAQ96QF7 691 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 OR52B2Q96RD2 323 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 VAT1Q99536 393 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 MRPL45Q9BRJ2 306 aaKnown RBP15.53■□□□□ 0.08
C9orf3-204ENST00000424143 SPATC1LQ9H0A9 340 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 LRRC4Q9HBW1 653 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 UBAP1Q9NZ09 502 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 AP4B1Q9Y6B7 739 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 SQORQ9Y6N5 450 aa15.53■□□□□ 0.08
C9orf3-204ENST00000424143 PIK3R2O00459 728 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 TXNDC9O14530 226 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 ACOT8O14734 319 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 GRID2O43424 1007 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 MFSD11O43934 449 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 NPHS1O60500 1241 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 SORBS2O94875 1100 aaKnown RBP15.52■□□□□ 0.08
C9orf3-204ENST00000424143 MAP3K6O95382 1288 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 EGFRP00533 1210 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 ERVK-10P10266 1014 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 GOT1P17174 413 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 PSMB4P28070 264 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 CLCN3P51790 818 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 TRAP1Q12931 704 aaKnown RBP15.52■□□□□ 0.08
C9orf3-204ENST00000424143 USP4Q13107 963 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 TTLL12Q14166 644 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-204ENST00000424143 ANO4Q32M45 955 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 DPH6Q7L8W6 267 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 LIMS2Q7Z4I7 341 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 ACOT1Q86TX2 421 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 SNX32Q86XE0 403 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 PLD6Q8N2A8 252 aaKnown RBP15.52■□□□□ 0.08
C9orf3-204ENST00000424143 RNF139Q8WU17 664 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 NTAN1Q96AB6 310 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 PGBD4Q96DM1 585 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 MPP4Q96JB8 637 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 MAELQ96JY0 434 aaKnown RBP15.52■□□□□ 0.08
C9orf3-204ENST00000424143 SPATA33Q96N06 139 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 LGMNQ99538 433 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 GPR22Q99680 433 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 HAUS8Q9BT25 410 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 ZBTB26Q9HCK0 441 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 SARDHQ9UL12 918 aa15.52■□□□□ 0.08
C9orf3-204ENST00000424143 FNDC1Q4ZHG4 1894 aaPredicted RBP15.52■□□□□ 0.07
C9orf3-204ENST00000424143 DNAJC25-GNG10A0A024R161 153 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 A0A1B0GVG6 124 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 E9PBE3 544 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 DCLK1O15075 740 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 KLHL41O60662 606 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 DDHD2O94830 711 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 C8BP07358 591 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 CCDC166P0CW27 439 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 TFEBP19484 476 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 TFE3P19532 575 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 HSPA1LP34931 641 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 NOS2P35228 1153 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 MLH1P40692 756 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 NUDT2P50583 147 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 THOP1P52888 689 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 TXNL4AP83876 142 aaKnown RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 MPP3Q13368 585 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 SOWAHAQ2M3V2 549 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 LSM12Q3MHD2 195 aaKnown RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 TBC1D25Q3MII6 688 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 RBM44Q6ZP01 1051 aaKnown RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 CDR2LQ86X02 465 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 MICALL2Q8IY33 904 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 TMEM151AQ8N4L1 468 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 TMEM102Q8N9M5 508 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 STYXQ8WUJ0 223 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 FAR2Q96K12 515 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 CDRT15Q96T59 188 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 UHRF1Q96T88 793 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 SLC17A6Q9P2U8 582 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 SUCOQ9UBS9 1254 aaKnown RBP15.51■□□□□ 0.07
C9orf3-204ENST00000424143 VANGL2Q9ULK5 521 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 CDYLQ9Y232 598 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 EVPLQ92817 2033 aa15.51■□□□□ 0.07
C9orf3-204ENST00000424143 TARM1B6A8C7 271 aa15.5■□□□□ 0.07
C9orf3-204ENST00000424143 TRIM38O00635 465 aa15.5■□□□□ 0.07
C9orf3-204ENST00000424143 SRGAP2BP0DMP2 458 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms