RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 PFKMP08237 780 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 TGM2P21980 687 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 TYK2P29597 1187 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 THOP1P52888 689 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 CDKL1Q00532 357 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 IRF9Q00978 393 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 NIPAL4Q0D2K0 466 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 CNGA3Q16281 694 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 KIZQ2M2Z5 673 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 MARCH8Q5T0T0 291 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 MAP3K21Q5TCX8 1036 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 PMF1Q6P1K2 205 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 LRRC39Q96DD0 335 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 MARK4Q96L34 752 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 FRMD8Q9BZ67 464 aaPredicted RBP14.66□□□□□ -0.06
MSH5-206ENST00000423982 DHX35Q9H5Z1 703 aaKnown RBP14.66□□□□□ -0.06
MSH5-206ENST00000423982 CAB39LQ9H9S4 337 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 ARHGAP26Q9UNA1 814 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 SSX2IPQ9Y2D8 614 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 AP4B1Q9Y6B7 739 aa14.66□□□□□ -0.06
MSH5-206ENST00000423982 IQCF3P0C7M6 154 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 NELFEP18615 380 aaKnown RBP14.65□□□□□ -0.06
MSH5-206ENST00000423982 NDST1P52848 882 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 HDAC4P56524 1084 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 MAP7Q14244 749 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 ACAP1Q15027 740 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 EML3Q32P44 896 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 JADE1Q6IE81 842 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 PYROXD2Q8N2H3 581 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 FAM156AQ8NDB6 213 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 CLEC4CQ8WTT0 213 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 FAM49BQ9NUQ9 324 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 TREHO43280 583 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 ATP5BP06576 529 aaKnown RBP14.65□□□□□ -0.06
MSH5-206ENST00000423982 CHRNGP07510 517 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 PSEN2P49810 448 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 C1QTNF8P60827 252 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 PURAQ00577 322 aaKnown RBP14.65□□□□□ -0.06
MSH5-206ENST00000423982 MS4A2Q01362 244 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 PDK1Q15118 436 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 ATF7IP2Q5U623 682 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 SNX32Q86XE0 403 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 NLRP7Q8WX94 980 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 ARNTL2Q8WYA1 636 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 KHSRPQ92945 711 aaKnown RBP eCLIP14.65□□□□□ -0.06
MSH5-206ENST00000423982 CDRT15Q96T59 188 aa14.65□□□□□ -0.06
MSH5-206ENST00000423982 A0A087WZ62 844 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 LACTBL1A8MY62 500 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 GABBR2O75899 941 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 LTFP02788 710 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 TCN1P20061 433 aaPredicted RBP14.65□□□□□ -0.07
MSH5-206ENST00000423982 PHKA2P46019 1235 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 RPL5P46777 297 aaKnown RBP14.65□□□□□ -0.07
MSH5-206ENST00000423982 TMEM198Q66K66 360 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 MARVELD2Q8N4S9 558 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 APBB2Q92870 758 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 FDXACB1Q9BRP7 624 aaPredicted RBP14.65□□□□□ -0.07
MSH5-206ENST00000423982 SPC25Q9HBM1 224 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 SYBUQ9NX95 663 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 PSMD13Q9UNM6 376 aa14.65□□□□□ -0.07
MSH5-206ENST00000423982 ZNF638Q14966 1978 aaKnown RBP14.64□□□□□ -0.07
MSH5-206ENST00000423982 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.64□□□□□ -0.07
MSH5-206ENST00000423982 ATP9BO43861 1147 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 B4GALT4O60513 344 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 HSPA4LO95757 839 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 FAM200BP0CF97 657 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 SRGAP2BP0DMP2 458 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 CPA3P15088 417 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 EPHA3P29320 983 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 DPP6P42658 865 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 XIAPP98170 497 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 PDK2Q15119 407 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 ZNF484Q5JVG2 852 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 IER5Q5VY09 327 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 MPZL3Q6UWV2 235 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 PTAR1Q7Z6K3 402 aaPredicted RBP14.64□□□□□ -0.07
MSH5-206ENST00000423982 C7orf31Q8N865 590 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 ACVR1CQ8NER5 493 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 BTBD9Q96Q07 612 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 CFHR5Q9BXR6 569 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 CDT1Q9H211 546 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 CASP8AP2Q9UKL3 1982 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 USP12O75317 370 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 GCATO75600 419 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 ASGR1P07306 291 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 TPSB2P20231 275 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 GRK4P32298 578 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 HARS2P49590 506 aaKnown RBP14.64□□□□□ -0.07
MSH5-206ENST00000423982 TPSAB1Q15661 275 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 KCNA10Q16322 511 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 BOLA3Q53S33 107 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 EPGNQ6UW88 154 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 AMIGO2Q86SJ2 522 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 LCA5Q86VQ0 697 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 DNAJB3Q8WWF6 145 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 ATP2A3Q93084 1043 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 SIKE1Q9BRV8 207 aa14.64□□□□□ -0.07
MSH5-206ENST00000423982 SENP6Q9GZR1 1112 aaPredicted RBP14.64□□□□□ -0.07
MSH5-206ENST00000423982 RBM38Q9H0Z9 239 aaKnown RBP14.64□□□□□ -0.07
MSH5-206ENST00000423982 STN1Q9H668 368 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms