RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 MAP3K6O95382 1288 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CALCAP01258 141 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 IGKV5-2P06315 115 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PROS1P07225 676 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 EPHX2P34913 555 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 TGFBR1P36897 503 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PRIM2P49643 509 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 HSD17B7P56937 341 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 TFAMQ00059 246 aaKnown RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 EPS8Q12929 822 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 POU6F1Q14863 301 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SYCE2Q6PIF2 218 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CDHR3Q6ZTQ4 885 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PAGE2Q7Z2X7 111 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SLC13A5Q86YT5 568 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SLC22A15Q8IZD6 547 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 NDUFAF2Q8N183 169 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 LNX1Q8TBB1 728 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 TNFRSF25Q93038 417 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CEP170P1Q96L14 293 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 RPL10LQ96L21 214 aaKnown RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 UCK2Q9BZX2 261 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CPVLQ9H3G5 476 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SYTL2Q9HCH5 934 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 TMEM39AQ9NV64 488 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PLK2Q9NYY3 685 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 MTRRQ9UBK8 725 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 DNAJB4Q9UDY4 337 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PCDHAC2Q9Y5I4 1007 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 NR2E3Q9Y5X4 410 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SF3B1O75533 1304 aaKnown RBP eCLIP6.98□□□□□ -1.296e-7■■■■■ 63.2
CNOT4-205ENST00000423368 CYP2D7A0A087X1C5 515 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 TRBV23-1A0A0A0MS06 115 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 TEX46H3BTG2 121 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 M0QX08 132 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 DFFAO00273 331 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 NFIBO00712 420 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PHGDHO43175 533 aaKnown RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 AKR7A2O43488 359 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 EXTL3O43909 919 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 DEAF1O75398 565 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 RBP1P09455 135 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 MSH3P20585 1137 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 TGM1P22735 817 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 GMPRP36959 345 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 TRAPPC10P48553 1259 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 RAB15P59190 212 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SNAP25P60880 206 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 STX3Q13277 289 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 EFR3AQ14156 821 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 MGAT5BQ3V5L5 792 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 NXNQ6DKJ4 435 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 HEATR3Q7Z4Q2 680 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 ADCK1Q86TW2 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CDR2LQ86X02 465 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CRLF3Q8IUI8 442 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 BBS7Q8IWZ6 715 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 DAGLBQ8NCG7 672 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 NSUN6Q8TEA1 469 aaKnown RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 RFFLQ8WZ73 363 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SDCCAG3Q96C92 435 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 HERPUD2Q9BSE4 406 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 NPLQ9BXD5 320 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 ACTR6Q9GZN1 396 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PNPLA3Q9NST1 481 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 DCAF16Q9NXF7 216 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SEPT3Q9UH03 358 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SCAF8Q9UPN6 1271 aaKnown RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 NEO1Q92859 1461 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 EFCAB6Q5THR3 1501 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CPDO75976 1380 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 POTEB3A0JP26 581 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L15C9J2P7 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L10C9JJH3 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L13C9JLJ4 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L12C9JPN9 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L11C9JVI0 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L21D6R901 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L18D6R9N7 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L22D6RA61 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L17D6RBQ6 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L19D6RCP7 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L20D6RJB6 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PTGES3LE9PB15 166 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PI4K2BG5E9Z4 385 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 M0R3G1 203 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 FTLP02792 175 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 KRT19P08727 400 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 RRM2P31350 389 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CDH5P33151 784 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 STAT1P42224 750 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 HCAR3P49019 387 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 GDI2P50395 445 aaKnown RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 DRG2P55039 364 aaKnown RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 ERVFC1P60507 584 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L24Q0WX57 530 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 ZNF846Q147U1 533 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SGCAQ16586 387 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 MTERF2Q49AM1 385 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CATSPEREQ5SY80 951 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms