RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OR6B2Q6IFH4 312 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3CQ6IPX1 549 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 DHRS13Q6UX07 377 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TBC1D3Q8IZP1 549 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-205ENST00000423214 OXR1Q8N573 874 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 PPP1R13BQ96KQ4 1090 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 SLC2A13Q96QE2 648 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 PRMT1Q99873 361 aaKnown RBP16.63■□□□□ 0.25
COL18A1-205ENST00000423214 SYNCQ9H7C4 482 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 EBF2Q9HAK2 575 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 RWDD2AQ9UIY3 292 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 RAXQ9Y2V3 346 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 TRPM6Q9BX84 2022 aa16.63■□□□□ 0.25
COL18A1-205ENST00000423214 FAM149AA5PLN7 773 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 BECN2A8MW95 431 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 C1QTNF3-AMACRE9PGA6 284 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 SLC7A4O43246 635 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 DAB1O75553 588 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 LDOC1O95751 146 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-205ENST00000423214 SLC9A1P19634 815 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 DRD3P35462 400 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 HNF1BP35680 557 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 ANP32AP39687 249 aaKnown RBP16.62■□□□□ 0.25
COL18A1-205ENST00000423214 UBE2HP62256 183 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 PPP2CBP62714 309 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 PPP2CAP67775 309 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 SMAD1Q15797 465 aaKnown RBP16.62■□□□□ 0.25
COL18A1-205ENST00000423214 EXOC3L4Q17RC7 722 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 NAPEPLDQ6IQ20 393 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 CXorf57Q6NSI4 855 aaKnown RBP16.62■□□□□ 0.25
COL18A1-205ENST00000423214 FBXL22Q6P050 247 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-205ENST00000423214 C11orf57Q6ZUT1 292 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-205ENST00000423214 FAM183BPQ6ZVS7 135 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 MARCH9Q86YJ5 346 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 C1orf131Q8NDD1 294 aaKnown RBP16.62■□□□□ 0.25
COL18A1-205ENST00000423214 CNDP2Q96KP4 475 aaKnown RBP16.62■□□□□ 0.25
COL18A1-205ENST00000423214 DKK4Q9UBT3 224 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 VPS28Q9UK41 221 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 VANGL2Q9ULK5 521 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 PCDHGC3Q9UN70 934 aa16.62■□□□□ 0.25
COL18A1-205ENST00000423214 SHROOM3Q8TF72 1996 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-205ENST00000423214 A0A1W2PR77 199 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 BNIP3LO60238 219 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 RFPL3O75679 317 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 ZNF18P17022 549 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 EPHA8P29322 1005 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-205ENST00000423214 KRT9P35527 623 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 GGCXP38435 758 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 MTIF2P46199 727 aaKnown RBP16.61■□□□□ 0.25
COL18A1-205ENST00000423214 PLK1P53350 603 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 PTK2Q05397 1052 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 ZNF177Q13360 481 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-205ENST00000423214 EIF4EBP2Q13542 120 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-205ENST00000423214 TPD52L1Q16890 204 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-205ENST00000423214 PRAMEF14Q5SWL7 426 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 PRPF39Q86UA1 669 aaKnown RBP16.61■□□□□ 0.25
COL18A1-205ENST00000423214 PDCD7Q8N8D1 485 aaKnown RBP16.61■□□□□ 0.25
COL18A1-205ENST00000423214 FRS2Q8WU20 508 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 SHC3Q92529 594 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 MUC3BQ9H195 1237 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 KDM4CQ9H3R0 1056 aa16.61■□□□□ 0.25
COL18A1-205ENST00000423214 GTPBP10A4D1E9 387 aaKnown RBP16.6■□□□□ 0.25
COL18A1-205ENST00000423214 TRABD2BA6NFA1 517 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 CBX4O00257 560 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 PLK4O00444 970 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 ALOX15BO15296 676 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 LATO43561 262 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 PLRG1O43660 514 aaKnown RBP16.6■□□□□ 0.25
COL18A1-205ENST00000423214 MAGEC1O60732 1142 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 RTN2O75298 545 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 MAT2AP31153 395 aaKnown RBP16.6■□□□□ 0.25
COL18A1-205ENST00000423214 NUDT1P36639 197 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 NXPH1P58417 271 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 APBA1Q02410 837 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 CYP4F3Q08477 520 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 AUHQ13825 339 aaKnown RBP16.6■□□□□ 0.25
COL18A1-205ENST00000423214 POM121L1PQ3SYA9 428 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 SETMARQ53H47 684 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-205ENST00000423214 OLFML1Q6UWY5 402 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 Q6ZVU0 165 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 SLC26A9Q7LBE3 791 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 PDZD3Q86UT5 571 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 TMPRSS12Q86WS5 348 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 EID2Q8N6I1 236 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 PIP4K2CQ8TBX8 421 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 SAP25Q8TEE9 199 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 HNRNPLLQ8WVV9 542 aaKnown RBP16.6■□□□□ 0.25
COL18A1-205ENST00000423214 NXPE2Q96DL1 559 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 CCDC114Q96M63 670 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-205ENST00000423214 PCDHGA1Q9Y5H4 931 aa16.6■□□□□ 0.25
COL18A1-205ENST00000423214 FASNP49327 2511 aaKnown RBP16.6■□□□□ 0.25
COL18A1-205ENST00000423214 IGSF10Q6WRI0 2623 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 E9PAM4 449 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 M0QYT0 321 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 TLR4O00206 839 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 WNT9AO14904 365 aa16.59■□□□□ 0.25
COL18A1-205ENST00000423214 ATP9BO43861 1147 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms