RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 ABHD17BQ5VST6 288 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 FAM160B1Q5W0V3 765 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ALG1LQ6GMV1 187 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CATSPER3Q86XQ3 398 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CRYBG2Q8N1P7 616 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 C1orf127Q8N9H9 656 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SPPL2BQ8TCT7 592 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 RNF138Q8WVD3 245 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 COX14Q96I36 57 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 PNKPQ96T60 521 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ZNF747Q9BV97 191 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 IL1RAPL2Q9NP60 686 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 GKN1Q9NS71 199 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SARDHQ9UL12 918 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ZNF451Q9Y4E5 1061 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ASB1Q9Y576 335 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 HS3ST3A1Q9Y663 406 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 EPN1Q9Y6I3 576 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CCDC187A0A096LP49 1063 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 GOLGA8CPA6NN73 597 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SURF6O75683 361 aaKnown RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 PEX11BO96011 259 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 FGF5P12034 268 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 DNASE1P24855 282 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 RPA1P27694 616 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 TNFSF9P41273 254 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ASPAP45381 313 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SSRP1Q08945 709 aaKnown RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 RALGDSQ12967 914 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 TGIF1Q15583 401 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ZNF672Q499Z4 452 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ARHGAP40Q5TG30 622 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ZKSCAN2Q63HK3 967 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ESRP1Q6NXG1 681 aaKnown RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 NEK5Q6P3R8 708 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SPOCD1Q6ZMY3 1216 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SPRED1Q7Z699 444 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 TRIML1Q8N9V2 468 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 TNPO1Q92973 898 aaKnown RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 RTP4Q96DX8 246 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SCMH1Q96GD3 660 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 TMEM87BQ96K49 555 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 WWC2-AS2Q96NR7 200 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 FCRL4Q96PJ5 515 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CITED4Q96RK1 184 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SMOQ99835 787 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 B3GNT5Q9BYG0 378 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 GAREM1Q9H706 876 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 PRMT7Q9NVM4 692 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 B3GALT1Q9Y5Z6 326 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 PCNX1Q96RV3 2341 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 LAD1O00515 517 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 PHF1O43189 567 aaPredicted RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 STC2O76061 302 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 CYP11B2P19099 503 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 MX1P20591 662 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 PXNP49023 591 aaPredicted RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 ARFIP2P53365 341 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 NFKB2Q00653 900 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 GRSF1Q12849 480 aaKnown RBP eCLIP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 IL10RAQ13651 578 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 ZNF234Q14588 700 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 EIF4HQ15056 248 aaKnown RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 ADCK5Q3MIX3 580 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 SEZ6Q53EL9 994 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 KLHL22Q53GT1 634 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 CATSPEREQ5SY80 951 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 HMBOX1Q6NT76 420 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 CYP4V2Q6ZWL3 525 aaPredicted RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 HAUS6Q7Z4H7 955 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 TMEM25Q86YD3 366 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 FANCBQ8NB91 859 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 TXNDC5Q8NBS9 432 aaKnown RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 OR2T3Q8NH03 318 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 LMO3Q8TAP4 145 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 WIPF2Q8TF74 440 aaPredicted RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 NAF1Q96HR8 494 aaKnown RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 WDR24Q96S15 920 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 KRT23Q9C075 422 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 ZDHHC3Q9NYG2 299 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 SUCOQ9UBS9 1254 aaKnown RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 TCRBV21S2A2A0A5A6 115 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 RAD51BO15315 384 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 DUX1O43812 170 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 DPM1O60762 260 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 SOAT2O75908 522 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 KLF8O95600 359 aaPredicted RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 ITGA4P13612 1032 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 EDN3P14138 238 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 PRKCSHP14314 528 aaPredicted RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 GOT1P17174 413 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 IBSPP21815 317 aaPredicted RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 U2AF2P26368 475 aaKnown RBP eCLIP1.92□□□□□ -2.13e-6■■□□□ 14.3
UBE2W-202ENST00000422906 MARK3P27448 753 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 RBMS1P29558 406 aaKnown RBP1.92□□□□□ -2.1
UBE2W-202ENST00000422906 SLC5A2P31639 672 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 UGT1A5P35504 534 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 CDC20Q12834 499 aa1.92□□□□□ -2.1
UBE2W-202ENST00000422906 MTERF2Q49AM1 385 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms