RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 AP4E1Q9UPM8 1137 aa21.7■■□□□ 1.07
USP48-205ENST00000421625 JUNP05412 331 aaKnown RBP21.7■■□□□ 1.06
USP48-205ENST00000421625 CLCN2P51788 898 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 STXBP2Q15833 593 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 GRTP1Q5TC63 336 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 TRIML2Q8N7C3 387 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 ACVR1CQ8NER5 493 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 EME1Q96AY2 570 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 RBBP8Q99708 897 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 NPAS2Q99743 824 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 THEGQ9P2T0 379 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 EPS15L1Q9UBC2 864 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 PSME4Q14997 1843 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 GABBR2O75899 941 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 PPARGP37231 505 aaPredicted RBP21.7■■□□□ 1.06
USP48-205ENST00000421625 PGGT1BP53609 377 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 SLC6A3Q01959 620 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 IER5Q5VY09 327 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 SEL1L3Q68CR1 1132 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 NXNQ6DKJ4 435 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 SEPT10Q9P0V9 454 aa21.7■■□□□ 1.06
USP48-205ENST00000421625 HDAC3O15379 428 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 PAPSS1O43252 624 aaPredicted RBP21.69■■□□□ 1.06
USP48-205ENST00000421625 GOT1P17174 413 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 FGFR3P22607 806 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 NR2C2P49116 596 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 ART3Q13508 389 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 TRIM50Q86XT4 487 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 CCDC185Q8N715 623 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 CLEC4CQ8WTT0 213 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 DLG3Q92796 817 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 HPDLQ96IR7 371 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 ACAD9Q9H845 621 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 BCAP29Q9UHQ4 241 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 BARX2Q9UMQ3 279 aaPredicted RBP21.69■■□□□ 1.06
USP48-205ENST00000421625 KPNA7A9QM74 516 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 RNF103O00237 685 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 GRID2O43424 1007 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 FARP2O94887 1054 aaPredicted RBP21.69■■□□□ 1.06
USP48-205ENST00000421625 CSPG5O95196 566 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 POLBP06746 335 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 ZNF23P17027 643 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 PPP1R26Q5T8A7 1209 aaPredicted RBP21.69■■□□□ 1.06
USP48-205ENST00000421625 TTC30AQ86WT1 665 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 ZNF385DQ9H6B1 395 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 COQ10BQ9H8M1 238 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 MINDY3Q9H8M7 445 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 PRDM16Q9HAZ2 1276 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 NMRAL1Q9HBL8 299 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 GGA3Q9NZ52 723 aa21.69■■□□□ 1.06
USP48-205ENST00000421625 TDRKHQ9Y2W6 561 aaKnown RBP21.69■■□□□ 1.06
USP48-205ENST00000421625 STT3AP46977 705 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 LPCAT2Q7L5N7 544 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 ERI1Q8IV48 349 aaKnown RBP21.68■■□□□ 1.06
USP48-205ENST00000421625 ISL2Q96A47 359 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 SUDS3Q9H7L9 328 aaPredicted RBP21.68■■□□□ 1.06
USP48-205ENST00000421625 CYP3A43Q9HB55 503 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 LCTP09848 1927 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 TK2O00142 265 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 VAPBO95292 243 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 ZFXP17010 805 aaPredicted RBP21.68■■□□□ 1.06
USP48-205ENST00000421625 LIMK2P53671 638 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 ADRM1Q16186 407 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 CLEC14AQ86T13 490 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 ZNF669Q96BR6 464 aaPredicted RBP21.68■■□□□ 1.06
USP48-205ENST00000421625 TEPSINQ96N21 525 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 CAAP1Q9H8G2 361 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 ZDHHC2Q9UIJ5 367 aa21.68■■□□□ 1.06
USP48-205ENST00000421625 ACKR2O00590 384 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 MFSD11O43934 449 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 USP12O75317 370 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 IL18RAPO95256 599 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 PIGNO95427 931 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 C2P06681 752 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 ICAM3P32942 547 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 RPL14P50914 215 aaKnown RBP21.67■■□□□ 1.06
USP48-205ENST00000421625 ARL13AQ5H913 290 aaPredicted RBP21.67■■□□□ 1.06
USP48-205ENST00000421625 PRAMEF18Q5VWM3 479 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 ZNF554Q86TJ5 538 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 TRAPPC12Q8WVT3 735 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 OXSMQ9NWU1 459 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 MAGED2Q9UNF1 606 aaPredicted RBP21.67■■□□□ 1.06
USP48-205ENST00000421625 FZD1Q9UP38 647 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 RAP2CQ9Y3L5 183 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 RLFQ13129 1914 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 ARHGEF37A1IGU5 675 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 SPRP35270 261 aaPredicted RBP21.67■■□□□ 1.06
USP48-205ENST00000421625 CDK9P50750 372 aaKnown RBP21.67■■□□□ 1.06
USP48-205ENST00000421625 POTEHQ6S545 545 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 CPSF7Q8N684 471 aaKnown RBP21.67■■□□□ 1.06
USP48-205ENST00000421625 FNDC8Q8TC99 324 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 MAML3Q96JK9 1138 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 HAUS8Q9BT25 410 aa21.67■■□□□ 1.06
USP48-205ENST00000421625 ZNF487B1APH4 448 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 IQCF3P0C7M6 154 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 GRIA4P48058 902 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 ALDH3B2P48448 385 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 NDST2P52849 883 aa21.66■■□□□ 1.06
USP48-205ENST00000421625 MXD4Q14582 209 aaPredicted RBP21.66■■□□□ 1.06
USP48-205ENST00000421625 OR52K1Q8NGK4 314 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 245.1 ms