RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 XYLT2Q9H1B5 865 aa9.33□□□□□ -0.92
TRIM39-206ENST00000420746 PRDM8Q9NQV8 689 aa9.33□□□□□ -0.92
TRIM39-206ENST00000420746 BLOC1S4Q9NUP1 217 aa9.33□□□□□ -0.92
TRIM39-206ENST00000420746 FOXJ2Q9P0K8 574 aa9.33□□□□□ -0.92
TRIM39-206ENST00000420746 KIF3AQ9Y496 699 aa9.33□□□□□ -0.92
TRIM39-206ENST00000420746 MTORP42345 2549 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 A6NNZ2 444 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 C9orf172C9J069 976 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 IRAK2O43187 625 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 CCDC130P13994 396 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 GUCY1B3Q02153 619 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 SEPT6Q14141 434 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 FGL2Q14314 439 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 FZD2Q14332 565 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 DRAP1Q14919 205 aaPredicted RBP9.32□□□□□ -0.92
TRIM39-206ENST00000420746 ME3Q16798 604 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 DEFB133Q30KQ1 61 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 KMT5BQ4FZB7 885 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 TMEM164Q5U3C3 297 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 FAM46CQ5VWP2 391 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 KYAT3Q6YP21 454 aaKnown RBP9.32□□□□□ -0.92
TRIM39-206ENST00000420746 GCNT7Q6ZNI0 430 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 SLC35F3Q8IY50 421 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 NECAB1Q8N987 351 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 TEX19Q8NA77 164 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 SPDYE1Q8NFV5 336 aaPredicted RBP9.32□□□□□ -0.92
TRIM39-206ENST00000420746 FBXO18Q8NFZ0 1043 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 WFDC5Q8TCV5 224 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 BTN2A2Q8WVV5 523 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 APOBEC4Q8WW27 367 aaKnown RBP9.32□□□□□ -0.92
TRIM39-206ENST00000420746 PTPRN2Q92932 1015 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 USP7Q93009 1102 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 CALML4Q96GE6 196 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 AK8Q96MA6 479 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 CMKLR1Q99788 373 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 SMYD3Q9H7B4 428 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 SYNDIG1Q9H7V2 258 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 MRPL44Q9H9J2 332 aaKnown RBP9.32□□□□□ -0.92
TRIM39-206ENST00000420746 KIAA1586Q9HCI6 787 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.32□□□□□ -0.92
TRIM39-206ENST00000420746 OLFML3Q9NRN5 406 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 ERVW-1Q9UQF0 538 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 PCDHB13Q9Y5F0 798 aa9.32□□□□□ -0.92
TRIM39-206ENST00000420746 RP1L1Q8IWN7 2480 aaPredicted RBP9.31□□□□□ -0.92
TRIM39-206ENST00000420746 SPTY2D1-AS1A0A0U1RR47 76 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 TTC34A8MYJ7 566 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 SLC31A1O15431 190 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 STX6O43752 255 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 CNTN5O94779 1100 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 TRIM21P19474 475 aaKnown RBP9.31□□□□□ -0.92
TRIM39-206ENST00000420746 ITIH1P19827 911 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 NOS2P35228 1153 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 ZFP36L1Q07352 338 aaKnown RBP9.31□□□□□ -0.92
TRIM39-206ENST00000420746 TRPC3Q13507 836 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 MCM6Q14566 821 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 NAA30Q147X3 362 aaPredicted RBP9.31□□□□□ -0.92
TRIM39-206ENST00000420746 ZNF284Q2VY69 593 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 ZNF542PQ5EBM4 170 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 ARL6IP4Q66PJ3 421 aaKnown RBP9.31□□□□□ -0.92
TRIM39-206ENST00000420746 TCTN3Q6NUS6 607 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 ESRP1Q6NXG1 681 aaKnown RBP9.31□□□□□ -0.92
TRIM39-206ENST00000420746 Q6ZSR6 202 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 ACOT1Q86TX2 421 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 UNC93AQ86WB7 457 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 MFN1Q8IWA4 741 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 SYCP3Q8IZU3 236 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 RAD54LQ92698 747 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 NKD1Q969G9 470 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 SLC45A3Q96JT2 553 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 FOXP3Q9BZS1 431 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 PCIF1Q9H4Z3 704 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 OLA1Q9NTK5 396 aaKnown RBP9.31□□□□□ -0.92
TRIM39-206ENST00000420746 INTS6Q9UL03 887 aaKnown RBP9.31□□□□□ -0.92
TRIM39-206ENST00000420746 PADI4Q9UM07 663 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 PHTF1Q9UMS5 762 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 HBS1LQ9Y450 684 aaKnown RBP9.31□□□□□ -0.92
TRIM39-206ENST00000420746 HS3ST3A1Q9Y663 406 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 SCN8AQ9UQD0 1980 aa9.31□□□□□ -0.92
TRIM39-206ENST00000420746 AKAP9Q99996 3911 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 RP1P56715 2156 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 A0A1B0GTL3 188 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 A0A1W2PQU0 124 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 C1QTNF3-AMACRE9PGA6 284 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 LMO7DNF2Z398 122 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 CASC3O15234 703 aaKnown RBP9.3□□□□□ -0.92
TRIM39-206ENST00000420746 ALOX15BO15296 676 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 HNRNPRO43390 633 aaKnown RBP9.3□□□□□ -0.92
TRIM39-206ENST00000420746 MOCS3O95396 460 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 LIFP15018 202 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 PRLRP16471 622 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 GAP43P17677 238 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 TNNI1P19237 187 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 ETV5P41161 510 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 RECQLP46063 649 aaPredicted RBP9.3□□□□□ -0.92
TRIM39-206ENST00000420746 SGSHP51688 502 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 TAS2R38P59533 333 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 MYL6P60660 151 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 ECT2LQ008S8 904 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 CCDC15Q0P6D6 951 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms