RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 CENPUQ71F23 418 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 SPRED2Q7Z698 418 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 DENND1CQ8IV53 801 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 BBS5Q8N3I7 341 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF557Q8N988 423 aaPredicted RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 SHKBP1Q8TBC3 707 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 CCDC110Q8TBZ0 833 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 SLC22A17Q8WUG5 538 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 PRCCQ92733 491 aaPredicted RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 AZIN2Q96A70 460 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 TIFAQ96CG3 184 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 CELF6Q96J87 481 aaKnown RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 PRICKLE1Q96MT3 831 aaPredicted RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 GDAP1L1Q96MZ0 367 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 LGMNQ99538 433 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 GDF15Q99988 308 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 HINFPQ9BQA5 517 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 SLC6A16Q9GZN6 736 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 GBA3Q9H227 469 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 NEUROG2Q9H2A3 272 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 PRDM12Q9H4Q4 367 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 TLE6Q9H808 572 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 KIF9Q9HAQ2 790 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 PIDD1Q9HB75 910 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 XAB2Q9HCS7 855 aaKnown RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 EIF2B3Q9NR50 452 aaKnown RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 RAB6BQ9NRW1 208 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 RSPH14Q9UHP6 348 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 XPO7Q9UIA9 1087 aaKnown RBP6.11□□□□□ -1.43
HMGB3-202ENST00000419110 TRHDEQ9UKU6 1024 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 HPCAL4Q9UM19 191 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 ARHGAP26Q9UNA1 814 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 ATP8A1Q9Y2Q0 1164 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 NEU2Q9Y3R4 380 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 TTLL3Q9Y4R7 772 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 HCFC2Q9Y5Z7 792 aa6.11□□□□□ -1.43
HMGB3-202ENST00000419110 C5orf60A6NFR6 353 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 SOBPA7XYQ1 873 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ERI2A8K979 691 aaKnown RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 RASA4BC9J798 803 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 EIF3HO15372 352 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 RASA4O43374 803 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 PPFIA2O75334 1257 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 CLDN11O75508 207 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 GCATO75600 419 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 TMEM63AO94886 807 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 CPP00450 1065 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 CYBBP04839 570 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 APRTP07741 180 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 FAM153BP0C7A2 387 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ZSCAN5DPP0CG00 497 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ETS1P14921 441 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 PTPN2P17706 415 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 HDCP19113 662 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 PTPN3P26045 913 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 PSMB4P28070 264 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 PHBP35232 272 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 RPL22P35268 128 aaKnown RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 MAGEA6P43360 314 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 NRIP1P48552 1158 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 MLLT6P55198 1093 aaPredicted RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 CDH4P55283 916 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 EIF3BP55884 814 aaKnown RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 YBEYP58557 167 aaPredicted RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 FAM193AP78312 1265 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 IFI35P80217 286 aaPredicted RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 IFFO1Q0D2I5 559 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 SEMA5AQ13591 1074 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 PRPSAP1Q14558 356 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF235Q14590 738 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 KCNJ11Q14654 390 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 PUS10Q3MIT2 529 aaKnown RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 FAM153CQ494X1 144 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 FAM133BQ5BKY9 247 aaKnown RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ADGRF1Q5T601 910 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 TMCO4Q5TGY1 634 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ALS2CLQ60I27 953 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 TXNDC8Q6A555 127 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 NADSYN1Q6IA69 706 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 FBXL22Q6P050 247 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 RHBDF2Q6PJF5 856 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 LRIG3Q6UXM1 1119 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF783Q6ZMS7 281 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 GAREM2Q75VX8 874 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 TRMT10CQ7L0Y3 403 aaKnown RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 C14orf80Q86SX3 495 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 CROCCP2Q86T23 111 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 TMEM150AQ86TG1 271 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 NLRP14Q86W24 1093 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 CIR1Q86X95 450 aaPredicted RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ARHGAP12Q8IWW6 846 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ZNF683Q8IZ20 524 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 PDIK1LQ8N165 341 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 UMODL1-AS1Q8N2C9 162 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 CCDC33Q8N5R6 958 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ARL14EPQ8N8R7 260 aaPredicted RBP6.1□□□□□ -1.43
HMGB3-202ENST00000419110 MAB21L3Q8N8X9 362 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 ATP11CQ8NB49 1132 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 GLIS1Q8NBF1 620 aa6.1□□□□□ -1.43
HMGB3-202ENST00000419110 TTC16Q8NEE8 873 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms