RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MAGEH1Q9H213 219 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 SNX12Q9UMY4 172 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 NDRG2Q9UN36 371 aaKnown RBP8.68□□□□□ -1.02
TRIM48-201ENST00000417545 EYSQ5T1H1 3165 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 COL4A3Q01955 1670 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 SHROOM3Q8TF72 1996 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 RASA4BC9J798 803 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 APOC4-APOC2K7ER74 178 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 ARNTLO00327 626 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 DCLK1O15075 740 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 SNPHO15079 494 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 NCAM2O15394 837 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 RASA4O43374 803 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 STK10O94804 968 aaKnown RBP8.67□□□□□ -1.02
TRIM48-201ENST00000417545 KAT7O95251 611 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 MAP3K6O95382 1288 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 APOC2P02655 101 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 FGGP02679 453 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 ASLP04424 464 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 COL4A2P08572 1712 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 DRD1P21728 446 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 CD70P32970 193 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 PTPN7P35236 360 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 GRIA2P42262 883 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 SLC6A11P48066 632 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 ARSEP51690 589 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 SEC13P55735 322 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 SULT2A1Q06520 285 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 AP1B1Q10567 949 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 LRRC32Q14392 662 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 PDK1Q15118 436 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 PLEKHG6Q3KR16 790 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 ACCSLQ4AC99 568 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 FNDC3BQ53EP0 1204 aaKnown RBP8.67□□□□□ -1.02
TRIM48-201ENST00000417545 PITRM1Q5JRX3 1037 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 MBLAC2Q68D91 279 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 SDE2Q6IQ49 451 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 TIGD7Q6NT04 549 aaPredicted RBP8.67□□□□□ -1.02
TRIM48-201ENST00000417545 AADACL2Q6P093 401 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 BBS12Q6ZW61 710 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 NLRP14Q86W24 1093 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 C12orf40Q86WS4 652 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 CDKL3Q8IVW4 592 aaPredicted RBP8.67□□□□□ -1.02
TRIM48-201ENST00000417545 PAF1Q8N7H5 531 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 OR7D4Q8NG98 312 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 FAM71BQ8TC56 605 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 WFDC5Q8TCV5 224 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 ARHGEF2Q92974 986 aaKnown RBP8.67□□□□□ -1.02
TRIM48-201ENST00000417545 FAF2Q96CS3 445 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 CHFRQ96EP1 664 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 SEPT10Q9P0V9 454 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 WNT16Q9UBV4 365 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 PLA2G4CQ9UP65 541 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 EFR3BQ9Y2G0 817 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 TBC1D30Q9Y2I9 924 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 RAD54BQ9Y620 910 aa8.67□□□□□ -1.02
TRIM48-201ENST00000417545 C5orf42Q9H799 3197 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 ZSCAN5CA6NGD5 496 aaPredicted RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 OTOL1A6NHN0 477 aaPredicted RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 C3orf70A6NLC5 250 aaPredicted RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 GFRA2O00451 464 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 CES2O00748 559 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 DCXO43602 365 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 TIMM44O43615 452 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 ZNF189O75820 626 aaPredicted RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 ALADP13716 330 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 MZF1P28698 734 aaPredicted RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 HLA-FP30511 346 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 ACTN2P35609 894 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 OPRD1P41143 372 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 NR2C2P49116 596 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 PAPOLAP51003 745 aaKnown RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 GALK1P51570 392 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 CKAP4Q07065 602 aaKnown RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 ZNF235Q14590 738 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 EIF4HQ15056 248 aaKnown RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 PAFAH1B3Q15102 231 aaKnown RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 FSCBQ5H9T9 825 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 DCAF12L1Q5VU92 463 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 HEATR6Q6AI08 1181 aaKnown RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 SLC9A4Q6AI14 798 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 CXorf57Q6NSI4 855 aaKnown RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 DARS2Q6PI48 645 aaKnown RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 NPNTQ6UXI9 565 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 NYAP1Q6ZVC0 841 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 TRMT11Q7Z4G4 463 aaKnown RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 ZC3H18Q86VM9 953 aaKnown RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 SLC13A5Q86YT5 568 aaPredicted RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 UMODL1-AS1Q8N2C9 162 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 CCDC33Q8N5R6 958 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 DCAF4L2Q8NA75 395 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 HMCESQ96FZ2 354 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 CCDC114Q96M63 670 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 FEM1AQ9BSK4 669 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 SLC39A8Q9C0K1 460 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 ETNK2Q9NVF9 386 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 UBA2Q9UBT2 640 aaPredicted RBP8.66□□□□□ -1.02
TRIM48-201ENST00000417545 NEU3Q9UQ49 428 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 SLC27A6Q9Y2P4 619 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms