RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 RARAP10276 462 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 ARL4AP40617 200 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 SLC1A1P43005 524 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 FNTBP49356 437 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 HADHBP55084 474 aaKnown RBP23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 SLC25A11Q02978 314 aaKnown RBP23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 DPYSL2Q16555 572 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 CA9Q16790 459 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 SMTNL2Q2TAL5 461 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 ZBTB44Q8NCP5 570 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 CCDC112Q8NEF3 446 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 KCTD15Q96SI1 283 aaPredicted RBP23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 SPON2Q9BUD6 331 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 MAGEH1Q9H213 219 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 NEU3Q9UQ49 428 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 CACNA1IQ9P0X4 2223 aa23.68■■□□□ 1.38
SMARCB1-205ENST00000417137 H3BRJ5 948 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 NRDCO43847 1150 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 RAMP2O60895 175 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 TCF4P15884 667 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 CNR2P34972 360 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 CTSOP43234 321 aaPredicted RBP23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 VASPP50552 380 aaPredicted RBP23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 ANO7Q6IWH7 933 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 RFX8Q6ZV50 586 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 KIAA1328Q86T90 577 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 RASSF3Q86WH2 238 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 PGBD3Q8N328 593 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 DCAF4L2Q8NA75 395 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 MRGPRX3Q96LB0 322 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 ATP13A1Q9HD20 1204 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 HPCAL4Q9UM19 191 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 RAD54BQ9Y620 910 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 ATG2BQ96BY7 2078 aa23.67■■□□□ 1.38
SMARCB1-205ENST00000417137 A0A0D9SEW6 157 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 PRKCHP24723 683 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 PXNP49023 591 aaPredicted RBP23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 YBEYP58557 167 aaPredicted RBP23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 SLC20A2Q08357 652 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 KRT81Q14533 505 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 POLD3Q15054 466 aaPredicted RBP23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 IL31Q6EBC2 164 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 RETSATQ6NUM9 610 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 KIAA1211LQ6NV74 962 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 MAP7D3Q8IWC1 876 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 HMGB4Q8WW32 186 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 RPL10LQ96L21 214 aaKnown RBP23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 FBRSQ9HAH7 460 aa23.66■■□□□ 1.38
SMARCB1-205ENST00000417137 HLA-EP13747 358 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 GOT1P17174 413 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 VAV2P52735 878 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 DMWDQ09019 674 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 BYSLQ13895 437 aaKnown RBP23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 ZFYVE27Q5T4F4 411 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 KCTD6Q8NC69 237 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 OR7D4Q8NG98 312 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 PSMB7Q99436 277 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 SEMA4AQ9H3S1 761 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 NDFIP2Q9NV92 336 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 CWC15Q9P013 229 aaKnown RBP23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 SLCO3A1Q9UIG8 710 aa23.65■■□□□ 1.38
SMARCB1-205ENST00000417137 CXorf51AA0A1B0GTR3 108 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 TARSL2A2RTX5 802 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 BTNL10A8MVZ5 291 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 CBX4O00257 560 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 NUMBP49757 651 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 NAP1L1P55209 391 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 CDH6P55285 790 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 CAMK2GQ13555 558 aaPredicted RBP23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 PDK2Q15119 407 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 HNRNPA1L2Q32P51 320 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 PARP15Q460N3 678 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 USP39Q53GS9 565 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 TXNRD3NBQ6F5E7 133 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 POLNQ7Z5Q5 900 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 LRRC8AQ8IWT6 810 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 UMODL1-AS1Q8N2C9 162 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 ACRBPQ8NEB7 543 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 MDGA1Q8NFP4 955 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 ARHGEF2Q92974 986 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 MYO19Q96H55 970 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 PHOX2BQ99453 314 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 CD248Q9HCU0 757 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 RCOR3Q9P2K3 495 aaPredicted RBP23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 VPS51Q9UID3 782 aa23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 REXO2Q9Y3B8 237 aaKnown RBP23.64■■□□□ 1.37
SMARCB1-205ENST00000417137 EDDM13A0A1B0GTR0 161 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 ARHGAP6O43182 974 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 LILRB5O75023 590 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 ERCC2P18074 760 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 GABRG2P18507 467 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 GJC1P36383 396 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 NBL1P41271 181 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 NDST2P52849 883 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 GEMIN4P57678 1058 aaKnown RBP23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 KIF5AQ12840 1032 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 ACCSLQ4AC99 568 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 LRRC38Q5VT99 294 aa23.63■■□□□ 1.37
SMARCB1-205ENST00000417137 ZNF354CQ86Y25 554 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms