RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 PTPRN2Q92932 1015 aa11.29□□□□□ -0.6
RBFOX2-208ENST00000416721 SPAG5Q96R06 1193 aa11.29□□□□□ -0.6
RBFOX2-208ENST00000416721 PLCB1Q9NQ66 1216 aa11.29□□□□□ -0.6
RBFOX2-208ENST00000416721 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
RBFOX2-208ENST00000416721 TNRC6BQ9UPQ9 1833 aaKnown RBP11.29□□□□□ -0.6
RBFOX2-208ENST00000416721 DMXL2Q8TDJ6 3036 aa11.29□□□□□ -0.6
RBFOX2-208ENST00000416721 FAM208BQ5VWN6 2430 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 A0A1B0GVM2 712 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 TCAF2A6NFQ2 919 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 C1QTNF3-AMACRE9PGA6 284 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 M0QYT0 321 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 KPNA3O00505 521 aaPredicted RBP11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 SLC31A1O15431 190 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 RFPL3O75679 317 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 CAPNS1P04632 268 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 DNA2P51530 1060 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 CCR5P51681 352 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 OXCT1P55809 520 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 SNX16P57768 344 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 PTK2Q05397 1052 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 CNTN1Q12860 1018 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 SLC12A1Q13621 1099 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 AUHQ13825 339 aaKnown RBP11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 EXOC3L4Q17RC7 722 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 TTC39BQ5VTQ0 682 aaPredicted RBP11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 C11orf57Q6ZUT1 292 aaPredicted RBP11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 TMEM110Q86TL2 294 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 PIP4K2CQ8TBX8 421 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 CPXM1Q96SM3 734 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 ORAI3Q9BRQ5 295 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 DYRK4Q9NR20 520 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 ADAMTS1Q9UHI8 967 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 SARDHQ9UL12 918 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 CA5BQ9Y2D0 317 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 ATRXP46100 2492 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 FREM2Q5SZK8 3169 aa11.28□□□□□ -0.6
RBFOX2-208ENST00000416721 HSF2BPO75031 334 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 SRGAP2O75044 1071 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 PAGE1O75459 146 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 PCDH8O95206 1070 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 PRLRP16471 622 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 NXPH1P58417 271 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 TARDBPQ13148 414 aaKnown RBP eCLIP11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 SMAD1Q15797 465 aaKnown RBP11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 NAPEPLDQ6IQ20 393 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 TRIM65Q6PJ69 517 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 LRRC69Q6ZNQ3 347 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 FAM183BPQ6ZVS7 135 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 TMPRSS12Q86WS5 348 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 C1orf131Q8NDD1 294 aaKnown RBP11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 SAP25Q8TEE9 199 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 CRELD1Q96HD1 420 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 FEM1AQ9BSK4 669 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 SPON2Q9BUD6 331 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 WDCPQ9H6R7 721 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 APEX2Q9UBZ4 518 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 SNX10Q9Y5X0 201 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 HS3ST4Q9Y661 456 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 PI4KAP42356 2102 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 PLXND1Q9Y4D7 1925 aa11.27□□□□□ -0.61
RBFOX2-208ENST00000416721 NBEAQ8NFP9 2946 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 ITPR1Q14643 2758 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 YKT6O15498 198 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 FFAR2O15552 330 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 MAGEC1O60732 1142 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 RNGTTO60942 597 aaKnown RBP11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 ADCY5O95622 1261 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 ERBB2P04626 1255 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 RHOCP08134 193 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 PNMA6AP0CW24 399 aaPredicted RBP11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 EPHA8P29322 1005 aaPredicted RBP11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 RECQLP46063 649 aaPredicted RBP11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 RPL34P49207 117 aaKnown RBP11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 SULT1E1P49888 294 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 IRAK1P51617 712 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 KRT83P78385 493 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 DAB2P98082 770 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 RAPGEF1Q13905 1077 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 ARID5BQ14865 1188 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 SHBQ15464 509 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 SETMARQ53H47 684 aaPredicted RBP11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 HES3Q5TGS1 186 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 LRRC31Q6UY01 552 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 LINGO4Q6UY18 593 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 BEND5Q7L4P6 421 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 TMC6Q7Z403 805 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 TFAP2DQ7Z6R9 452 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 C14orf80Q86SX3 495 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 WDTC1Q8N5D0 677 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 MFSD2AQ8NA29 543 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 GRIN3AQ8TCU5 1115 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 NXPE2Q96DL1 559 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 KLHDC7BQ96G42 594 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 FAM81BQ96LP2 452 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 CCDC114Q96M63 670 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 CALN1Q9BXU9 219 aa11.26□□□□□ -0.61
RBFOX2-208ENST00000416721 TKTL2Q9H0I9 626 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms