RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 UBE2OQ9C0C9 1292 aaKnown RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 IQCGQ9H095 443 aaKnown RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 TKTL2Q9H0I9 626 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 CRISPLD1Q9H336 500 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 MMADHCQ9H3L0 296 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 MANSC1Q9H8J5 431 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 NMUR1Q9HB89 426 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 ARHGEF4Q9NR80 690 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 MRPL17Q9NRX2 175 aaKnown RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.86□□□□□ -0.51
RFFL-205ENST00000415395 COX16Q9P0S2 106 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 GMIPQ9P107 970 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 TLR6Q9Y2C9 796 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SLC27A5Q9Y2P5 690 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SLC38A8A6NNN8 435 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 EEF2KO00418 725 aaKnown RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 ADAM12O43184 909 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SMNDC1O75940 238 aaKnown RBP eCLIP11.86□□□□□ -0.51
RFFL-205ENST00000415395 TPBGLP0DKB5 382 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 CSH1P0DML2 217 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 CSH2P0DML3 217 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 GOT1P17174 413 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 ARFIP2P53365 341 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 USP46P62068 366 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 NRG1Q02297 640 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 ZBTB16Q05516 673 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 KRT72Q14CN4 511 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 PAFAH1B3Q15102 231 aaKnown RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 SDHAF4Q5VUM1 108 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SNX30Q5VWJ9 437 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 NCBP2-AS2Q69YL0 99 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 C3orf62Q6ZUJ4 267 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 RFX8Q6ZV50 586 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 PDZD4Q76G19 769 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 CLNKQ7Z7G1 428 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 VPS52Q8N1B4 723 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 PYROXD2Q8N2H3 581 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 PPFIBP2Q8ND30 876 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 ARMC2Q8NEN0 867 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 STMN2Q93045 179 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 RNF34Q969K3 372 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 UTP4Q969X6 686 aaKnown RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 MCUR1Q96AQ8 359 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SPDL1Q96EA4 605 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 RAD9AQ99638 391 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 BTBD10Q9BSF8 475 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 HTATIP2Q9BUP3 242 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 TSSK1BQ9BXA7 367 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 VCXQ9H320 206 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 NPHS2Q9NP85 383 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 ZFATQ9P243 1243 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 SAE1Q9UBE0 346 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 ZMYND8Q9ULU4 1186 aaPredicted RBP11.86□□□□□ -0.51
RFFL-205ENST00000415395 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
RFFL-205ENST00000415395 PLXNA4Q9HCM2 1894 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 CLUHO75153 1309 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.85□□□□□ -0.51
RFFL-205ENST00000415395 H7C0C1 242 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 LPXNO60711 386 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 FGF18O76093 207 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 INHBAP08476 426 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 LINC00271P0C7V0 271 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 ZSCAN5DPP0CG00 497 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 CTSAP10619 480 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 ATF6P18850 670 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 GCKP35557 465 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 VHLP40337 213 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 ATP5OP48047 213 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 KPNA1P52294 538 aaPredicted RBP11.85□□□□□ -0.51
RFFL-205ENST00000415395 TPI1P60174 286 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 TAF10Q12962 218 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 FASTKD3Q14CZ7 662 aaKnown RBP11.85□□□□□ -0.51
RFFL-205ENST00000415395 MUM1Q2TAK8 710 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 C6orf163Q5TEZ5 329 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 FAM91A1Q658Y4 838 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 DARS2Q6PI48 645 aaKnown RBP11.85□□□□□ -0.51
RFFL-205ENST00000415395 C1orf228Q6PIY5 440 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 CAPN12Q6ZSI9 719 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 PRUNE1Q86TP1 453 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 HERC6Q8IVU3 1022 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 C7orf61Q8IZ16 206 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 NAT8LQ8N9F0 302 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 BANPQ8N9N5 519 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 CASP10Q92851 521 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 SLC7A6OSQ96CW6 309 aaPredicted RBP11.85□□□□□ -0.51
RFFL-205ENST00000415395 TRMT2BQ96GJ1 504 aaKnown RBP11.85□□□□□ -0.51
RFFL-205ENST00000415395 APOPT1Q96IL0 206 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 NSL1Q96IY1 281 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 MYRFLQ96LU7 910 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 ZBED2Q9BTP6 218 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 OSBPL1AQ9BXW6 950 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 ZBP1Q9H171 429 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.85□□□□□ -0.51
RFFL-205ENST00000415395 LZTS1Q9Y250 596 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 SLC4A7Q9Y6M7 1214 aa11.85□□□□□ -0.51
RFFL-205ENST00000415395 KLF11O14901 512 aa11.84□□□□□ -0.51
RFFL-205ENST00000415395 DCLK1O15075 740 aa11.84□□□□□ -0.51
RFFL-205ENST00000415395 NCAM2O15394 837 aa11.84□□□□□ -0.51
RFFL-205ENST00000415395 CREB3O43889 395 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms