RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 SLCO3A1Q9UIG8 710 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 SALL4Q9UJQ4 1053 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 CEP83Q9Y592 693 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 PCDHB11Q9Y5F2 797 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 CSNK1G3Q9Y6M4 447 aa16.29■□□□□ 0.2
CPNE1-208ENST00000414711 H3BM21 787 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 JMJD7P0C870 316 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 VAV1P15498 845 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 NME1P15531 152 aaKnown RBP16.28■□□□□ 0.2
CPNE1-208ENST00000414711 ELAVL4P26378 380 aaKnown RBP16.28■□□□□ 0.2
CPNE1-208ENST00000414711 HOXD13P35453 343 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 ASPAP45381 313 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 CD97P48960 835 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 CASP4P49662 377 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 ECT2LQ008S8 904 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 CNTN1Q12860 1018 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 CDH18Q13634 790 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 BECN1Q14457 450 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 GCNT7Q6ZNI0 430 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 MMS22LQ6ZRQ5 1243 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 ZFAND4Q86XD8 727 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 KLK6Q92876 244 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 EPSTI1Q96J88 318 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 CCDC3Q9BQI4 270 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 IRX2Q9BZI1 471 aaPredicted RBP16.28■□□□□ 0.2
CPNE1-208ENST00000414711 STRADBQ9C0K7 418 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 SFMBT1Q9UHJ3 866 aa16.28■□□□□ 0.2
CPNE1-208ENST00000414711 POLQO75417 2590 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 NTN3O00634 580 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-208ENST00000414711 IRAK2O43187 625 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 AQP9O43315 295 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 MSI1O43347 362 aaKnown RBP16.27■□□□□ 0.2
CPNE1-208ENST00000414711 CD2BP2O95400 341 aaKnown RBP16.27■□□□□ 0.2
CPNE1-208ENST00000414711 VNN1O95497 513 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 HNRNPA2B1P22626 353 aaKnown RBP16.27■□□□□ 0.2
CPNE1-208ENST00000414711 TNFRSF8P28908 595 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 SLC6A4P31645 630 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 RPIAP49247 311 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 CLDN2P57739 230 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 ZNF787Q6DD87 383 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 OR6B2Q6IFH4 312 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 PTAR1Q7Z6K3 402 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-208ENST00000414711 ABI3BPQ7Z7G0 1075 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 XXYLT1Q8NBI6 393 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 HJURPQ8NCD3 748 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-208ENST00000414711 PRICKLE1Q96MT3 831 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-208ENST00000414711 FOXP3Q9BZS1 431 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 ZNF71Q9NQZ8 489 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-208ENST00000414711 CCDC39Q9UFE4 941 aa16.27■□□□□ 0.2
CPNE1-208ENST00000414711 SPENQ96T58 3664 aaKnown RBP16.26■□□□□ 0.19
CPNE1-208ENST00000414711 PRAMEF33A0A0G2JMD5 474 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 GOLGA6L7A0A1B0GV03 622 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 A0A1W2PQU0 124 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 A6NNZ2 444 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 D6RAR5 112 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 K7ELQ4 463 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-208ENST00000414711 PRAMEF10O60809 474 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 CSF2P04141 144 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 STK19P49842 368 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-208ENST00000414711 TAS2R38P59533 333 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 INCA1Q0VD86 236 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 FZD2Q14332 565 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 ZNF284Q2VY69 593 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 FAM133BQ5BKY9 247 aaKnown RBP16.26■□□□□ 0.19
CPNE1-208ENST00000414711 FSCBQ5H9T9 825 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 FAM46CQ5VWP2 391 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 Q6ZSR6 202 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 PARGQ86W56 976 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 SLC35F3Q8IY50 421 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 CARNMT1Q8N4J0 409 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 C9orf43Q8TAL5 461 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-208ENST00000414711 SSC4DQ8WTU2 575 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 RPL10LQ96L21 214 aaKnown RBP16.26■□□□□ 0.19
CPNE1-208ENST00000414711 IL12RB2Q99665 862 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 BOCQ9BWV1 1114 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 NT5C1AQ9BXI3 368 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 SLC12A9Q9BXP2 914 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 FOXJ2Q9P0K8 574 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 SARDHQ9UL12 918 aa16.26■□□□□ 0.19
CPNE1-208ENST00000414711 A1L4Q6 167 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 TYW5A2RUC4 315 aaKnown RBP16.25■□□□□ 0.19
CPNE1-208ENST00000414711 TMX2-CTNND1H3BSU7 103 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 TPP1O14773 563 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 CLIC2O15247 247 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 TGFB1I1O43294 461 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 MTSS1O43312 755 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 MOCS3O95396 460 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 BMP15O95972 392 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 AP3M2P53677 418 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 SGSM1Q2NKQ1 1148 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 RAB41Q5JT25 222 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 PPP1R26Q5T8A7 1209 aaPredicted RBP16.25■□□□□ 0.19
CPNE1-208ENST00000414711 RRAGBQ5VZM2 374 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 DTX1Q86Y01 620 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 DCP2Q8IU60 420 aaKnown RBP16.25■□□□□ 0.19
CPNE1-208ENST00000414711 TICAM1Q8IUC6 712 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 CCDC65Q8IXS2 484 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 PLEKHO2Q8TD55 490 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 LMX1AQ8TE12 382 aa16.25■□□□□ 0.19
CPNE1-208ENST00000414711 RNF139Q8WU17 664 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms