RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 TM9SF3Q9HD45 589 aa11.93□□□□□ -0.5
LINC00963-201ENST00000412141 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
LINC00963-201ENST00000412141 SEPT11Q9NVA2 429 aaKnown RBP11.93□□□□□ -0.5
LINC00963-201ENST00000412141 DNAAF2Q9NVR5 837 aaKnown RBP11.93□□□□□ -0.5
LINC00963-201ENST00000412141 SLC25A13Q9UJS0 675 aa11.93□□□□□ -0.5
LINC00963-201ENST00000412141 NOCTQ9UK39 431 aaKnown RBP11.93□□□□□ -0.5
LINC00963-201ENST00000412141 FNDC3AQ9Y2H6 1198 aaKnown RBP11.93□□□□□ -0.5
LINC00963-201ENST00000412141 PCDHB9Q9Y5E1 797 aa11.93□□□□□ -0.5
LINC00963-201ENST00000412141 K7ERQ8 282 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 HYAL3O43820 417 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-201ENST00000412141 CLDN11O75508 207 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 ENDOD1O94919 500 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 LSM8O95777 96 aaKnown RBP11.92□□□□□ -0.5
LINC00963-201ENST00000412141 MT-CO1P00395 513 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 F9P00740 461 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 STAT1P42224 750 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 AFF3P51826 1226 aaKnown RBP11.92□□□□□ -0.5
LINC00963-201ENST00000412141 SHC2P98077 582 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 FMO1Q01740 532 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 CDR2Q01850 454 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 MYL5Q02045 173 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 SULT2A1Q06520 285 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 SLC12A1Q13621 1099 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 DLG2Q15700 870 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 BRMS1LQ5PSV4 323 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 PRAMEF14Q5SWL7 426 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 CCDC183Q5T5S1 534 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 KIAA0895LQ68EN5 471 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 LINGO4Q6UY18 593 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 RBM43Q6ZSC3 357 aaKnown RBP11.92□□□□□ -0.5
LINC00963-201ENST00000412141 Q6ZVU0 165 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 NAXDQ8IW45 347 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 AOPEPQ8N6M6 819 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 PNPLA1Q8N8W4 532 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 KDM1BQ8NB78 822 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 C1orf216Q8TAB5 229 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 ALG14Q96F25 216 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 SPON2Q9BUD6 331 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 SCNM1Q9BWG6 230 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 ARHGEF38Q9NXL2 777 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 SIK3Q9Y2K2 1263 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 SNX11Q9Y5W9 270 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 PCDH15Q96QU1 1955 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 SPEGQ15772 3267 aa11.92□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3DA0A087WVF3 549 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3IA0A087WXS9 549 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3EA0A087X179 549 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3KA0A087X1G2 549 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 A0A0D9SEW6 157 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3FA6NER0 549 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-201ENST00000412141 LRRC72A6NJI9 287 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3LB9A6J9 549 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 GJB3O75712 270 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 IGHV4-34P06331 123 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3HP0C7X1 549 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 GLDCP23378 1020 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 RRM1P23921 792 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 CD27P26842 260 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 PLK1P53350 603 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 CDH4P55283 916 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 OXCT1P55809 520 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 IL9RQ01113 521 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 SFSWAPQ12872 951 aaKnown RBP11.91□□□□□ -0.5
LINC00963-201ENST00000412141 ELAVL3Q14576 367 aaKnown RBP11.91□□□□□ -0.5
LINC00963-201ENST00000412141 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TEAD4Q15561 434 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TRIP6Q15654 476 aaKnown RBP11.91□□□□□ -0.5
LINC00963-201ENST00000412141 C15orf59Q2T9L4 293 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-201ENST00000412141 KCNT1Q5JUK3 1230 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3GQ6DHY5 549 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3CQ6IPX1 549 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 USP30Q70CQ3 517 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TBC1D3Q8IZP1 549 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-201ENST00000412141 CHCHD4Q8N4Q1 142 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 ATP11CQ8NB49 1132 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 OR7D4Q8NG98 312 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 JOSD2Q8TAC2 188 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 FRS2Q8WU20 508 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 RXFP2Q8WXD0 754 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 NT5C3BQ969T7 300 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 SLC6A18Q96N87 628 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 PCDHB18PQ96TA0 734 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 MAGEB5Q9BZ81 275 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 ZDHHC5Q9C0B5 715 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 PCED1AQ9H1Q7 454 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 EBF2Q9HAK2 575 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 AASDHPPTQ9NRN7 309 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TM7SF3Q9NS93 570 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 LIMA1Q9UHB6 759 aaKnown RBP11.91□□□□□ -0.5
LINC00963-201ENST00000412141 TMEM59LQ9UK28 342 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 SARDHQ9UL12 918 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 SCML1Q9UN30 329 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 ANKRD6Q9Y2G4 727 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 PAXBP1Q9Y5B6 917 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 OR51B4Q9Y5P0 310 aa11.91□□□□□ -0.5
LINC00963-201ENST00000412141 ITIH6Q6UXX5 1313 aa11.9□□□□□ -0.5
LINC00963-201ENST00000412141 LGALS16A8MUM7 142 aa11.9□□□□□ -0.5
LINC00963-201ENST00000412141 UPK3BL1B0FP48 263 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms