RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 FTSJ3Q8IY81 847 aaKnown RBP2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 OTUD7AQ8TE49 926 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 ZNF830Q96NB3 372 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 PRPF18Q99633 342 aaKnown RBP2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 NAP1L4Q99733 375 aaKnown RBP2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 PIMREGQ9BSJ6 248 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 SORBS1Q9BX66 1292 aaKnown RBP2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 PANK2Q9BZ23 570 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 SLC25A32Q9H2D1 315 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 TP63Q9H3D4 680 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 DNAJB11Q9UBS4 358 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 ZNF69Q9UC07 566 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 VPS51Q9UID3 782 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 LMTK3Q96Q04 1460 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 NLRP1Q9C000 1473 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 ARHGAP31Q2M1Z3 1444 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 UACAQ9BZF9 1416 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 SCRIBQ14160 1630 aa2.75□□□□□ -1.97
HMGB3P2-201ENST00000411913 DENND4BO75064 1496 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 A0A0B4J293 547 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 A0A0G2JK05 382 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 ERI2A8K979 691 aaKnown RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 A8MVJ9 347 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 BTBD18B2RXH4 712 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 IPO5O00410 1097 aaKnown RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 DYNC1I1O14576 645 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 ASNA1O43681 348 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 SH3BP5O60239 455 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 ZNF500O60304 480 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 FAM155BO75949 473 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 LETM1O95202 739 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 TNFRSF6BO95407 300 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 VIPP01282 170 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 ARP10275 920 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 HGFP14210 728 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 DDIT3P35638 169 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 PGDP52209 483 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 TIAL1Q01085 375 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 GAD2Q05329 585 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 CCDC15Q0P6D6 951 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 SF3B4Q15427 424 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 SMTNL2Q2TAL5 461 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 TAF3Q5VWG9 929 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 ABLIM2Q6H8Q1 611 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 LIN54Q6MZP7 749 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 SPSB3Q6PJ21 355 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 CYP26C1Q6V0L0 522 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 RASGRP3Q8IV61 690 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 NRSN1Q8IZ57 195 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 C11orf44Q8N8P7 122 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 MBD3L2Q8NHZ7 208 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 SPPL3Q8TCT6 385 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 ABHD5Q8WTS1 349 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 TMEM174Q8WUU8 243 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 PHF21BQ96EK2 531 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 TBATAQ96M53 351 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 HIST1H2AAQ96QV6 131 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 NUDT22Q9BRQ3 303 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 DDX23Q9BUQ8 820 aaKnown RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 CINPQ9BW66 212 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 CCDC94Q9BW85 323 aaPredicted RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 MAF1Q9H063 256 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 PABPC3Q9H361 631 aaKnown RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 CHMP4BQ9H444 224 aaKnown RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 CDCP1Q9H5V8 836 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 ZNF556Q9HAH1 456 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 ITM2CQ9NQX7 267 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 SAGE1Q9NXZ1 904 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 IPO11Q9UI26 975 aaKnown RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 MMP24Q9Y5R2 645 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 TIAM1Q13009 1591 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 COL15A1P39059 1388 aa2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 KTN1Q86UP2 1357 aaKnown RBP2.74□□□□□ -1.97
HMGB3P2-201ENST00000411913 SPATA31A1Q5TZJ5 1347 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 ZNF335Q9H4Z2 1342 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 LRRC9Q6ZRR7 1453 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 ARHGAP35Q9NRY4 1499 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 SRRM3A6NNA2 597 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 PCDH17O14917 1159 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 DHHO43323 396 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 SNX2O60749 519 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 PRAMEF2O60811 474 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 ACTL6BO94805 426 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 SERPINB2P05120 415 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 ANXA6P08133 673 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 SRGAP2BP0DMP2 458 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 CST5P28325 142 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 RFX2P48378 723 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 PNLIPRP1P54315 467 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 ALDH18A1P54886 795 aaKnown RBP2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 WDR5P61964 334 aaKnown RBP2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 GPS1Q13098 491 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 EFR3AQ14156 821 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 CLCA4Q14CN2 919 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 ST3GAL2Q16842 350 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 FAM76BQ5HYJ3 339 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 FBXO47Q5MNV8 452 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 C6orf10Q5SRN2 563 aa2.73□□□□□ -1.97
HMGB3P2-201ENST00000411913 ATPAF1Q5TC12 328 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms