RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TLX3O43711 291 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-220ENST00000411464 SLC2A3P11169 496 aa17.22■□□□□ 0.35
MRPL55-220ENST00000411464 PLK1P53350 603 aa17.22■□□□□ 0.35
MRPL55-220ENST00000411464 TTC39BQ5VTQ0 682 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-220ENST00000411464 DENND1BQ6P3S1 775 aa17.22■□□□□ 0.35
MRPL55-220ENST00000411464 ARHGEF19Q8IW93 802 aa17.22■□□□□ 0.35
MRPL55-220ENST00000411464 SPATA20Q8TB22 786 aa17.22■□□□□ 0.35
MRPL55-220ENST00000411464 SLC39A7Q92504 469 aa17.22■□□□□ 0.35
MRPL55-220ENST00000411464 ERCC4Q92889 916 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-220ENST00000411464 RNF34Q969K3 372 aa17.22■□□□□ 0.35
MRPL55-220ENST00000411464 THAP9Q9H5L6 903 aa17.22■□□□□ 0.35
MRPL55-220ENST00000411464 GCN1Q92616 2671 aaKnown RBP17.22■□□□□ 0.35
MRPL55-220ENST00000411464 ASXL3Q9C0F0 2248 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 C1QTNF3-AMACRE9PGA6 284 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 PLRG1O43660 514 aaKnown RBP17.21■□□□□ 0.35
MRPL55-220ENST00000411464 ZNF18P17022 549 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 GLDCP23378 1020 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 METAP1P53582 386 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 TMEM110Q86TL2 294 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 TRIM69Q86WT6 500 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 CIR1Q86X95 450 aaPredicted RBP17.21■□□□□ 0.35
MRPL55-220ENST00000411464 FRS2Q8WU20 508 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 FGF11Q92914 225 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 FAM131CQ96AQ9 280 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 SLC4A5Q9BY07 1137 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 PRORYQ9H606 182 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 SLC25A13Q9UJS0 675 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 CNTN6Q9UQ52 1028 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 CLCA2Q9UQC9 943 aa17.21■□□□□ 0.35
MRPL55-220ENST00000411464 BPTFQ12830 3046 aa17.21■□□□□ 0.34
MRPL55-220ENST00000411464 A0A1B0GVM2 712 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 TCAF2A6NFQ2 919 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 E5RJQ4 531 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 PRAMEF26H0Y7S4 382 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 ATXN7O15265 892 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-220ENST00000411464 SDC3O75056 442 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 LETM1O95202 739 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-220ENST00000411464 IGLV3-25P01717 112 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 PRB1P04280 392 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 ACP1P24666 158 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 CCR1P32246 355 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 PPP1R2P41236 205 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 CDK17Q00537 523 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 E2F1Q01094 437 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 CNTN1Q12860 1018 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 MEA1Q16626 185 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 SETMARQ53H47 684 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-220ENST00000411464 HS1BP3Q53T59 392 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 ISM2Q6H9L7 571 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 KANSL1Q7Z3B3 1105 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 CACTIN-AS1Q8N1I8 211 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 SNIP1Q8TAD8 396 aaKnown RBP17.2■□□□□ 0.34
MRPL55-220ENST00000411464 KLHDC7BQ96G42 594 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 KREMEN1Q96MU8 473 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 RPRD1AQ96P16 312 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-220ENST00000411464 FCRL3Q96P31 734 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-220ENST00000411464 PRMT1Q99873 361 aaKnown RBP17.2■□□□□ 0.34
MRPL55-220ENST00000411464 FAM204AQ9H8W3 233 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 SARDHQ9UL12 918 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 PPM1HQ9ULR3 514 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 RAI2Q9Y5P3 530 aa17.2■□□□□ 0.34
MRPL55-220ENST00000411464 SMG1Q96Q15 3661 aaKnown RBP17.2■□□□□ 0.34
MRPL55-220ENST00000411464 SYNJ2BP-COX16A0A087WUM0 186 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-220ENST00000411464 MCF2LO15068 1137 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 ALOX15BO15296 676 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 ATP9BO43861 1147 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 BRINP1O60477 761 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 ACTN2P35609 894 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 VASPP50552 380 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-220ENST00000411464 KCNH2Q12809 1159 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 ZNF177Q13360 481 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-220ENST00000411464 ZNF211Q13398 564 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-220ENST00000411464 DLG2Q15700 870 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 PROX2Q3B8N5 592 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 POM121L1PQ3SYA9 428 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 KLHL10Q6JEL2 608 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 CXorf57Q6NSI4 855 aaKnown RBP17.19■□□□□ 0.34
MRPL55-220ENST00000411464 FBXL22Q6P050 247 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 ZNF606Q8WXB4 792 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 RFFLQ8WZ73 363 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 FEM1AQ9BSK4 669 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 UBE2TQ9NPD8 197 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-220ENST00000411464 DDIT4Q9NX09 232 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 COX16Q9P0S2 106 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 VPS28Q9UK41 221 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 COL5A1P20908 1838 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-220ENST00000411464 KNTC1P50748 2209 aa17.19■□□□□ 0.34
MRPL55-220ENST00000411464 TMEM131Q92545 1883 aa17.18■□□□□ 0.34
MRPL55-220ENST00000411464 THAP12O43422 761 aa17.18■□□□□ 0.34
MRPL55-220ENST00000411464 SIGLEC6O43699 453 aa17.18■□□□□ 0.34
MRPL55-220ENST00000411464 BNIP3LO60238 219 aa17.18■□□□□ 0.34
MRPL55-220ENST00000411464 RNGTTO60942 597 aaKnown RBP17.18■□□□□ 0.34
MRPL55-220ENST00000411464 PITX1P78337 314 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-220ENST00000411464 INSM1Q01101 510 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-220ENST00000411464 EIF4EBP2Q13542 120 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-220ENST00000411464 AUHQ13825 339 aaKnown RBP17.18■□□□□ 0.34
MRPL55-220ENST00000411464 TAF5Q15542 800 aa17.18■□□□□ 0.34
MRPL55-220ENST00000411464 AGBL4Q5VU57 503 aa17.18■□□□□ 0.34
MRPL55-220ENST00000411464 DCBLD1Q8N8Z6 715 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms