RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CLSTN3Q9BQT9 956 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 THUMPD3Q9BV44 507 aaKnown RBP5.2□□□□□ -1.58
LSM5-205ENST00000409952 VN1R3Q9BXE9 311 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 CTDSP1Q9GZU7 261 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 ADPRHL2Q9NX46 363 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.2□□□□□ -1.58
LSM5-205ENST00000409952 TRPV2Q9Y5S1 764 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 SNX14Q9Y5W7 946 aa5.2□□□□□ -1.58
LSM5-205ENST00000409952 UBE2QL1A1L167 161 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 CDRT15L2A8MXV6 281 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 GOLGA6L6A8MZA4 724 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 PRR5-ARHGAP8B1AHC4 643 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 KCNJ18B7U540 433 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 E7ENX8 843 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 PER2O15055 1255 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 IPO8O15397 1037 aaKnown RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 SYNCRIPO60506 623 aaKnown RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 SLC22A3O75751 556 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 STC2O76061 302 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 TMEM225BP0DP42 221 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 P4HA1P13674 534 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 ZNF8P17098 575 aaPredicted RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 DESP17661 470 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 GCSHP23434 173 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 CPT2P23786 658 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 ADORA2AP29274 412 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 HPDP32754 393 aaPredicted RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 HNF1BP35680 557 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 TCF7P36402 384 aaPredicted RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 SLC15A1P46059 708 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 LIG4P49917 911 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 TAS2R50P59544 299 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 RAC3P60763 192 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 EFNB1P98172 346 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 TAP2Q03519 686 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 ABHD18Q0P651 414 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 BFSP2Q13515 415 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 CAMK2DQ13557 499 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 CBFBQ13951 182 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 KCNJ12Q14500 433 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 DPCR1Q3MIW9 517 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 AASDHQ4L235 1098 aaPredicted RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 ZNF805Q5CZA5 627 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 KRBOX4Q5JUW0 171 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 TMEM81Q6P7N7 255 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 MAMDC4Q6UXC1 1216 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 KIAA1324Q6UXG2 1013 aaKnown RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 ZNF804AQ7Z570 1209 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 ABRAQ8N0Z2 381 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 ZNF619Q8N2I2 560 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.19□□□□□ -1.58
LSM5-205ENST00000409952 METTL25Q8N6Q8 603 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 TRIML1Q8N9V2 468 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 Q8TCH9 128 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 GRK7Q8WTQ7 553 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 ZFPM2Q8WW38 1151 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 CNOT9Q92600 299 aaKnown RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 DVL3Q92997 716 aaPredicted RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 PTP4A1Q93096 173 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 LOXL4Q96JB6 756 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 PKNOX2Q96KN3 472 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 KLHL15Q96M94 604 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 C8orf49Q96NF6 230 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 FIZ1Q96SL8 496 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 MAP7D2Q96T17 732 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 PNKPQ96T60 521 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 TCF25Q9BQ70 676 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 MRPL1Q9BYD6 325 aaKnown RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 SLC32A1Q9H598 525 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 CXorf56Q9H5V9 222 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 EPHX3Q9H6B9 360 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 SCPEP1Q9HB40 452 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 TRIM36Q9NQ86 728 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 PFDN4Q9NQP4 134 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 VSX1Q9NZR4 365 aaPredicted RBP5.19□□□□□ -1.58
LSM5-205ENST00000409952 OAZ3Q9UMX2 235 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 SORCS3Q9UPU3 1222 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 SLC30A1Q9Y6M5 507 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 SESN1Q9Y6P5 492 aa5.19□□□□□ -1.58
LSM5-205ENST00000409952 CCDC187A0A096LP49 1063 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 A0A0U1RQK1 487 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 ZNF320A2RRD8 509 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 DRGXA6NNA5 263 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 DDX39AO00148 427 aaKnown RBP5.18□□□□□ -1.58
LSM5-205ENST00000409952 WDR46O15213 610 aaKnown RBP5.18□□□□□ -1.58
LSM5-205ENST00000409952 FOXS1O43638 330 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 HMMRO75330 724 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 HLA-DOAP06340 250 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 TMIGD3P0DMS9 266 aaPredicted RBP5.18□□□□□ -1.58
LSM5-205ENST00000409952 GABRB1P18505 474 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 HLA-DPA1P20036 260 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 SCP2P22307 547 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 FGFR4P22455 802 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 MMP8P22894 467 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 PTAFRP25105 342 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 MGAT1P26572 445 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 MVDP53602 400 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 FOXL2P58012 376 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 CDK18Q07002 472 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 CSRP2Q16527 193 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms