RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 COG7P83436 770 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 SUZ12Q15022 739 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 IRF2BP2Q7Z5L9 587 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 FAM217AQ8IXS0 508 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 FAM186BQ8IYM0 893 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 CPXM2Q8N436 756 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 DDI1Q8WTU0 396 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 TMEM174Q8WUU8 243 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 TAF4BQ92750 862 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 NT5C1AQ9BXI3 368 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 LHX5Q9H2C1 402 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 TMEM245Q9H330 911 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 MTG2Q9H4K7 406 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 VIPAS39Q9H9C1 493 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 CLIC5Q9NZA1 410 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 NENFQ9UMX5 172 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 PLXNA2O75051 1894 aa13.17□□□□□ -0.3
CHRNA1-205ENST00000409542 ZNF185O15231 689 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 TLX3O43711 291 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 GFPT2O94808 682 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 FSBPO95073 299 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 C7P10643 843 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 SLC9A1P19634 815 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 HLA-FP30511 346 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 CTSKP43235 329 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 PSEN1P49768 467 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 SGSHP51688 502 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 JAM2P57087 298 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 RPS14P62263 151 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 APBA1Q02410 837 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 DCAF17Q5H9S7 520 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 BHLHA9Q7RTU4 235 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 TMC2Q8TDI7 906 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 IGSF8Q969P0 613 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 SPAG5Q96R06 1193 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 TLR10Q9BXR5 811 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 PCED1AQ9H1Q7 454 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 EBF2Q9HAK2 575 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 PRSS16Q9NQE7 514 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 MARCH2Q9P0N8 246 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 RAI2Q9Y5P3 530 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 TP53BP1Q12888 1972 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 KNTC1P50748 2209 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 ASH1LQ9NR48 2969 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 FLNBO75369 2602 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 A0A087X0T9 212 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 PCDHGA12O60330 932 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 SEMA4FO95754 770 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 CYBBP04839 570 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 FAM228BP0C875 321 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 GRK6P43250 576 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 GRIA4P48058 902 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 CCT8P50990 548 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 PPP3CAQ08209 521 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 CASP8Q14790 479 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 EIF4HQ15056 248 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 FNDC3BQ53EP0 1204 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 CHST9Q7L1S5 443 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 TADA2BQ86TJ2 420 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 ADIPOR2Q86V24 386 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 GATAD2AQ86YP4 633 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 FMNL3Q8IVF7 1028 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 WFDC5Q8TCV5 224 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 TAS1R2Q8TE23 839 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 SLC2A11Q9BYW1 496 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 OSGEPQ9NPF4 335 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 PRDM4Q9UKN5 801 aa13.16□□□□□ -0.3
CHRNA1-205ENST00000409542 TULP2O00295 520 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 CES2O00748 559 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 TIMM44O43615 452 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 WNT1P04628 370 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 IGHV4-34P06331 123 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 TRIM49P0CI25 452 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 TRIM49CP0CI26 452 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 FERP16591 822 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 PAFAH1B1P43034 410 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 ABCG1P45844 678 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 GCLMP48507 274 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 YWHAGP61981 247 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 ARID5AQ03989 594 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 C2orf54Q08AI8 447 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 DNAJC3Q13217 504 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 SHBQ15464 509 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 TEAD4Q15561 434 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 TRIP4Q15650 581 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 IFI16Q16666 785 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 RAB41Q5JT25 222 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 ZNF771Q7L3S4 317 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 ZNF571Q7Z3V5 609 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 KIAA0907Q7Z7F0 614 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 PIGZQ86VD9 579 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms