RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 BNC2Q6ZN30 1099 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 FBXO16Q8IX29 292 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ELMOD1Q8N336 334 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ANGPTL6Q8NI99 470 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 RP9Q8TA86 221 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 SHKBP1Q8TBC3 707 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 TMC2Q8TDI7 906 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 RASSF5Q8WWW0 418 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 TFAP2CQ92754 450 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 ACDQ96AP0 544 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 KREMEN1Q96MU8 473 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 SLITRK1Q96PX8 696 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PKP2Q99959 881 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 EBF4Q9BQW3 602 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 WDR83Q9BRX9 315 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 HEMGNQ9BXL5 484 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 SLC13A1Q9BZW2 595 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 WDR12Q9GZL7 423 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 C12orf65Q9H3J6 166 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 TMEM206Q9H813 350 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 CD320Q9NPF0 282 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PDGFCQ9NRA1 345 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 PARVAQ9NVD7 372 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 THG1LQ9NWX6 298 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 DDX56Q9NY93 547 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 HEMK1Q9Y5R4 338 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 TEX264Q9Y6I9 313 aa10.85□□□□□ -0.67
NIF3L1-204ENST00000409357 TCRBV9S1A1TA0A576 114 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 RGSL1A5PLK6 1076 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 GOLGA8CPA6NN73 597 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ACOT8O14734 319 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 GIPC1O14908 333 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 CLPXO76031 633 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 APOEP02649 317 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ERBB2P04626 1255 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 SERPINE1P05121 402 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 TRIM49P0CI25 452 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 TRIM49CP0CI26 452 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ENDOUP21128 410 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ME2P23368 584 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 TUBA1BP68363 451 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 CDC20Q12834 499 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 KLF10Q13118 480 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ACAP1Q15027 740 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 CYP2A13Q16696 494 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 NHSL2Q5HYW2 709 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 TCHHL1Q5QJ38 904 aaPredicted RBP10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 FNBP1LQ5T0N5 605 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 CES4AQ5XG92 561 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 MBLAC2Q68D91 279 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 PLEKHA7Q6IQ23 1121 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 FAM117BQ6P1L5 589 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 CDHR3Q6ZTQ4 885 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 FRMD7Q6ZUT3 714 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 TUBA1AQ71U36 451 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 SLC47A2Q86VL8 602 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 BPHLQ86WA6 291 aaPredicted RBP10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ANKMY2Q8IV38 441 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 SLC7A5P1Q8MH63 180 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ANKFN1Q8N957 763 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 GLIS1Q8NBF1 620 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 KYQ8NBH2 561 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 S100ZQ8WXG8 99 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 TANKQ92844 425 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 LRRC39Q96DD0 335 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ALPK1Q96QP1 1244 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 NPLQ9BXD5 320 aaPredicted RBP10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ABHD16BQ9H3Z7 469 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 ARMC7Q9H6L4 198 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 CAAP1Q9H8G2 361 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 MRGBPQ9NV56 204 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 RAB20Q9NX57 234 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 COL20A1Q9P218 1284 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 IP6K2Q9UHH9 426 aa10.84□□□□□ -0.67
NIF3L1-204ENST00000409357 TRIM49D1C9J1S8 452 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 KBTBD13C9JR72 458 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 NOL3O60936 208 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 CPNE6O95741 557 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 UGT2B4P06133 528 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 WEE2P0C1S8 567 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 NCAM1P13591 858 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 EIF2AK2P19525 551 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 M6PRP20645 277 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 ACADSBP45954 432 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 PSMC6P62333 389 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 RPS6P62753 249 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 KRT76Q01546 638 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 PPP3CAQ08209 521 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 KCNA1Q09470 495 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 TRAP1Q12931 704 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 NFATC3Q12968 1075 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 PDK1Q15118 436 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 INSCQ1MX18 579 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 MSS51Q4VC12 460 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 FAM209AQ5JX71 171 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 C1orf220Q5T0J3 134 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 BTBD8Q5XKL5 378 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 MON1BQ7L1V2 547 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 PHF13Q86YI8 300 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms