RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 TMEM135Q86UB9 458 aa16.92■□□□□ 0.3
COL23A1-202ENST00000407622 EFCAB3Q8N7B9 438 aa16.92■□□□□ 0.3
COL23A1-202ENST00000407622 ZNF781Q8N8C0 355 aa16.92■□□□□ 0.3
COL23A1-202ENST00000407622 OR6Y1Q8NGX8 325 aa16.92■□□□□ 0.3
COL23A1-202ENST00000407622 PPP4R1Q8TF05 950 aa16.92■□□□□ 0.3
COL23A1-202ENST00000407622 FERMT1Q9BQL6 677 aa16.92■□□□□ 0.3
COL23A1-202ENST00000407622 MAN1C1Q9NR34 630 aa16.92■□□□□ 0.3
COL23A1-202ENST00000407622 DNAJC28Q9NX36 388 aa16.92■□□□□ 0.3
COL23A1-202ENST00000407622 DDX43Q9NXZ2 648 aaKnown RBP16.92■□□□□ 0.3
COL23A1-202ENST00000407622 GNEQ9Y223 722 aaKnown RBP16.92■□□□□ 0.3
COL23A1-202ENST00000407622 MYBPHLA2RUH7 354 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 G3V2L1 256 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 MAP3K7O43318 606 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 PDE5AO76074 875 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 FAM200BP0CF97 657 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 ALOX15P16050 662 aaPredicted RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 CYP2B6P20813 491 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 GRK2P25098 689 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 PDPK2PQ6A1A2 396 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 AGR3Q8TD06 166 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 MAPK15Q8TD08 544 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 EDEM1Q92611 657 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 ISL2Q96A47 359 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 YIPF3Q9GZM5 350 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 CASS4Q9NQ75 786 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 CHRAC1Q9NRG0 131 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 DLGAP2Q9P1A6 1054 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 CPA4Q9UI42 421 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 SORCS3Q9UPU3 1222 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 ZNF236Q9UL36 1845 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 ARHGAP42A6NI28 874 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 LTFP02788 710 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 SLC10A3P09131 477 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 SKIP12755 728 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 NCAM1P13591 858 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 NFKB1P19838 968 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 NCF2P19878 526 aaPredicted RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 GARSP41250 739 aaKnown RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 CCNHP51946 323 aaPredicted RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 BEX3Q00994 111 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 PPIDQ08752 370 aaKnown RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 PCBP1Q15365 356 aaKnown RBP eCLIP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 TWF2Q6IBS0 349 aaKnown RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 IRGCQ6NXR0 463 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 PPP1R10Q96QC0 940 aaKnown RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 ZNF184Q99676 751 aaPredicted RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 STN1Q9H668 368 aaKnown RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 PRDM16Q9HAZ2 1276 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 GPBP1L1Q9HC44 474 aaPredicted RBP16.91■□□□□ 0.3
COL23A1-202ENST00000407622 DDIT4Q9NX09 232 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 ANGPTL2Q9UKU9 493 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 TLL2Q9Y6L7 1015 aa16.91■□□□□ 0.3
COL23A1-202ENST00000407622 A0A096LPK6 155 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 LOC100653049A0A140TA62 436 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 ZBTB14O43829 449 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 AP1G2O75843 785 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 KRT34O76011 436 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 BAG2O95816 211 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 SP100P23497 879 aaPredicted RBP16.9■□□□□ 0.3
COL23A1-202ENST00000407622 SERPINB8P50452 374 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 COPAP53621 1224 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 EPHB1P54762 984 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 ITGA7Q13683 1181 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 SLC9B1Q4ZJI4 515 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 PLEKHH3Q7Z736 793 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 TLK2Q86UE8 772 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 FAM35AQ86V20 835 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 PPFIBP2Q8ND30 876 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 PCED1BQ96HM7 432 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 CYP4F11Q9HBI6 524 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 BFARQ9NZS9 450 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 FLRT1Q9NZU1 646 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 FBXW11Q9UKB1 542 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
COL23A1-202ENST00000407622 KLHL2O95198 593 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 MX2P20592 715 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 LRPAP1P30533 357 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 SPRP35270 261 aaPredicted RBP16.9■□□□□ 0.3
COL23A1-202ENST00000407622 CCR10P46092 362 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 PSEN2P49810 448 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 C6orf163Q5TEZ5 329 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 RNF111Q6ZNA4 994 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 BHLHA9Q7RTU4 235 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 CLEC14AQ86T13 490 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 PHC3Q8NDX5 983 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 C3orf58Q8NDZ4 430 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 PYDC1Q8WXC3 89 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 CELF6Q96J87 481 aaKnown RBP16.9■□□□□ 0.3
COL23A1-202ENST00000407622 SENP8Q96LD8 212 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 GBA3Q9H227 469 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 COG4Q9H9E3 785 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 CPSF2Q9P2I0 782 aaKnown RBP16.9■□□□□ 0.3
COL23A1-202ENST00000407622 PCDHB12Q9Y5F1 795 aa16.9■□□□□ 0.3
COL23A1-202ENST00000407622 E9PBE3 544 aa16.89■□□□□ 0.29
COL23A1-202ENST00000407622 KIF3CO14782 793 aa16.89■□□□□ 0.29
COL23A1-202ENST00000407622 DCXO43602 365 aa16.89■□□□□ 0.29
COL23A1-202ENST00000407622 KLHL41O60662 606 aa16.89■□□□□ 0.29
COL23A1-202ENST00000407622 CHRM1P11229 460 aaPredicted RBP16.89■□□□□ 0.29
COL23A1-202ENST00000407622 NMBRP28336 390 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms