RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TIMM50Q3ZCQ8 353 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 IL27RAQ6UWB1 636 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 IZUMO2Q6UXV1 221 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 TINF2Q9BSI4 451 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 FAM126AQ9BYI3 521 aaPredicted RBP12.25□□□□□ -0.45
SMCR8-201ENST00000406438 FAM187BQ17R55 369 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 METTL7BQ6UX53 244 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 RPTNQ6XPR3 784 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 USP49Q70CQ1 688 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 UBE2E3Q969T4 207 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 RNF145Q96MT1 663 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 BTN3A1O00481 513 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 NDST1P52848 882 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 ARMC12Q5T9G4 340 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 N4BP2L1Q5TBK1 243 aaPredicted RBP12.25□□□□□ -0.45
SMCR8-201ENST00000406438 WDR93Q6P2C0 686 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 SIX5Q8N196 739 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 GNPTGQ9UJJ9 305 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 PCDHA3Q9Y5H8 950 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 LYVE1Q9Y5Y7 322 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 AXLP30530 894 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 RHAGQ02094 409 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 DDI2Q5TDH0 399 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SCARA3Q6AZY7 606 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 ZSCAN18Q8TBC5 510 aaPredicted RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 HTR3CQ8WXA8 447 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 ATAD3AQ9NVI7 634 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SOHLH2Q9NX45 425 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 ARL15Q9NXU5 204 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 TMEM216Q9P0N5 145 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 DAPK2Q9UIK4 370 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 CNTRLQ7Z7A1 2325 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 MGRN1O60291 552 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 PSMD4P55036 377 aaKnown RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SAMD4BQ5PRF9 694 aaKnown RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 BHLHB9Q6PI77 547 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 MAML3Q96JK9 1138 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SYT15Q9BQS2 421 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 EPB41L4AQ9HCS5 686 aaPredicted RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 CD248Q9HCU0 757 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SERPINE1P05121 402 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 CSF1RP07333 972 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 PRG2P13727 222 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 ALOX12P18054 663 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 STAT5AP42229 794 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 NEK3P51956 506 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 VCPIP1Q96JH7 1222 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 MCCC1Q96RQ3 725 aaPredicted RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 IL22Q9GZX6 179 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SPATC1LQ9H0A9 340 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 MMP13P45452 471 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 TUFMP49411 452 aaKnown RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 CDK7P50613 346 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 INSCQ1MX18 579 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SCUBE3Q8IX30 993 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 DNAJB3Q8WWF6 145 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SOCS4Q8WXH5 440 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 OR10H2O60403 315 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 TSPAN3O60637 253 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 PROSCO94903 275 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SERPINA4P29622 427 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 PPP4CP60510 307 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 BTG3Q14201 252 aaPredicted RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 NEDD8Q15843 81 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 TTC23Q5W5X9 447 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 ZNF470Q6ECI4 717 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 DOK6Q6PKX4 331 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 EXOC3L1Q86VI1 746 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 PGLYRP2Q96PD5 576 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SPATA5L1Q9BVQ7 753 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 ATP13A1Q9HD20 1204 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SNX6Q9UNH7 406 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 SLC9A8Q9Y2E8 581 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 TNPO3Q9Y5L0 923 aaKnown RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 CYP1A1P04798 512 aaPredicted RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 EIF2B2P49770 351 aaKnown RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 FDXACB1Q9BRP7 624 aaPredicted RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 KPNA5O15131 536 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 USP17L7P0C7H9 530 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 GP5P40197 560 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 PTENP60484 403 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 CAMK1Q14012 370 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 KYAT3Q6YP21 454 aaKnown RBP12.24□□□□□ -0.45
SMCR8-201ENST00000406438 PEX5LQ8IYB4 626 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 DCLK3Q9C098 648 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 PCDHGC5Q9Y5F6 944 aa12.24□□□□□ -0.45
SMCR8-201ENST00000406438 C15orf38-AP3S2A0A0A6YYH1 394 aa12.23□□□□□ -0.45
SMCR8-201ENST00000406438 KPNA3O00505 521 aaPredicted RBP12.23□□□□□ -0.45
SMCR8-201ENST00000406438 KHDRBS3O75525 346 aaKnown RBP12.23□□□□□ -0.45
SMCR8-201ENST00000406438 MTAPQ13126 283 aa12.23□□□□□ -0.45
SMCR8-201ENST00000406438 NAB1Q13506 487 aa12.23□□□□□ -0.45
SMCR8-201ENST00000406438 CES5AQ6NT32 575 aa12.23□□□□□ -0.45
SMCR8-201ENST00000406438 ARPINQ7Z6K5 226 aa12.23□□□□□ -0.45
SMCR8-201ENST00000406438 SMYD1Q8NB12 490 aa12.23□□□□□ -0.45
SMCR8-201ENST00000406438 COL26A1Q96A83 441 aa12.23□□□□□ -0.45
SMCR8-201ENST00000406438 TBCDQ9BTW9 1192 aa12.23□□□□□ -0.45
SMCR8-201ENST00000406438 MYRFQ9Y2G1 1151 aa12.23□□□□□ -0.45
SMCR8-201ENST00000406438 PHGDHO43175 533 aaKnown RBP12.23□□□□□ -0.45
SMCR8-201ENST00000406438 MGAT1P26572 445 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms