RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CTDSP1Q9GZU7 261 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 EPHX3Q9H6B9 360 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 NAALADL1Q9UQQ1 740 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 B3GNT3Q9Y2A9 372 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 LYVE1Q9Y5Y7 322 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 KDM3AQ9Y4C1 1321 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 FHOD3Q2V2M9 1422 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 FMN1Q68DA7 1419 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 B4DLN1 442 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 MCIDASD6RGH6 385 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 FYB1O15117 783 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 STRNO43815 780 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 SGPL1O95470 568 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 ESRRBO95718 433 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 HLA-DQA2P01906 255 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 PEPDP12955 493 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 APEHP13798 732 aaKnown RBP5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 ARSAP15289 507 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 FPR3P25089 353 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 MLH1P40692 756 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 STAT6P42226 847 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 RAD52P43351 418 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 RPL7AP62424 266 aaKnown RBP5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 GOLGA8DPQ0D2H9 430 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 NEXNQ0ZGT2 675 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 TDGQ13569 410 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 RNASE12Q5GAN4 147 aaKnown RBP5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 CFAP58Q5T655 872 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 GJB7Q6PEY0 223 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 C16orf54Q6UWD8 224 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 DCDC5Q6ZRR9 648 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 PRRT2Q7Z6L0 340 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 PXKQ7Z7A4 578 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 MON1AQ86VX9 555 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 OR8H2Q8N162 312 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 TERB1Q8NA31 727 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 NSUN4Q96CB9 384 aaKnown RBP5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 KLHL29Q96CT2 875 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 NR1H4Q96RI1 486 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 SERINC2Q96SA4 455 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 ABHD14AQ9BUJ0 271 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 MUC13Q9H3R2 512 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 SEMA4BQ9NPR2 832 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 ASNSD1Q9NWL6 643 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 SEMA5BQ9P283 1151 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 PKP3Q9Y446 797 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 SPATA31A5Q5VU36 1347 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 SPATA31A6Q5VVP1 1343 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 SPATA31A7Q8IWB4 1347 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 DHX57Q6P158 1386 aaKnown RBP5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 MRC2Q9UBG0 1479 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 EFCAB5A4FU69 1503 aa5.13□□□□□ -1.59
HMGB3P18-201ENST00000406327 TIAM1Q13009 1591 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 CUL7Q14999 1698 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 LINC00473A8K010 186 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 H7C1Q1 480 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 CLIC1O00299 241 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 DSCR3O14972 297 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 PER2O15055 1255 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 TNFSF14O43557 240 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 DOK2O60496 412 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 USP12O75317 370 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 PTP4A3O75365 173 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 GCATO75600 419 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 CNTN5O94779 1100 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 ENO1P06733 434 aaKnown RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 DRD4P21917 467 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 SFPQP23246 707 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 CTCFP49711 727 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 VPS41P49754 854 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 ADPRHP54922 357 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 KRTAP10-2P60368 255 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 RPS3AP61247 264 aaKnown RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 UFM1P61960 85 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 WTAPQ15007 396 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 LARS2Q15031 903 aaKnown RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 FAM133BQ5BKY9 247 aaKnown RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 RILPL1Q5EBL4 403 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 LAIR1Q6GTX8 287 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 CEP85Q6P2H3 762 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 TMEM200AQ86VY9 491 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 UEVLDQ8IX04 471 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 C16orf71Q8IYS4 520 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 ADGRF3Q8IZF5 1079 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 C11orf65Q8NCR3 313 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 C1orf131Q8NDD1 294 aaKnown RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 CREB3L4Q8TEY5 395 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 LINC00476Q8WZB0 136 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 CCDC17Q96LX7 622 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 GPR78Q96P69 363 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 CADM1Q9BY67 442 aaKnown RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 GHITMQ9H3K2 345 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 TMPRSS5Q9H3S3 457 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 NKIRAS2Q9NYR9 191 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 IL1RAPL1Q9NZN1 696 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 DHDHQ9UQ10 334 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 HEMK1Q9Y5R4 338 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 ABCA5Q8WWZ7 1642 aa5.12□□□□□ -1.59
HMGB3P18-201ENST00000406327 TEX13CA0A0J9YWL9 993 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms