RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 DCDC2BA2VCK2 349 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 MEI4A8MW99 385 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 OXTRP30559 389 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 NNMTP40261 264 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 MAMLD1Q13495 774 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 NFKBIBQ15653 356 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 DGLUCYQ7Z3D6 616 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 OR7D4Q8NG98 312 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 PTPRN2Q92932 1015 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 ZNF419Q96HQ0 510 aaPredicted RBP18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 PPP1R9BQ96SB3 815 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 PSMB7Q99436 277 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 SPON2Q9BUD6 331 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 FBRSQ9HAH7 460 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 VPS51Q9UID3 782 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 SLC25A13Q9UJS0 675 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 DCHS1Q96JQ0 3298 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 THADAQ6YHU6 1953 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 ITIH6Q6UXX5 1313 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 A0A1W2PQJ5 194 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 BNIP3LO60238 219 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 RNASEH1O60930 286 aaKnown RBP18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 MT-CO1P00395 513 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 IGLV3-19P01714 112 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 GLDCP23378 1020 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 ACSL1P33121 698 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 PSMD8P48556 350 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 TTC31Q49AM3 519 aaPredicted RBP18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 C6orf118Q5T5N4 469 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 ACBD5Q5T8D3 534 aaPredicted RBP18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 LRSAM1Q6UWE0 723 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 LINGO4Q6UY18 593 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 SETD3Q86TU7 594 aaPredicted RBP18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 PYROXD2Q8N2H3 581 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 FRS2Q8WU20 508 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 ZNF653Q96CK0 615 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 FAM129BQ96TA1 746 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 CNPY3Q9BT09 278 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 PABPC3Q9H361 631 aaKnown RBP18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 PARVAQ9NVD7 372 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 SERGEFQ9UGK8 458 aa18.64■□□□□ 0.57
PTPRN2-204ENST00000404321 CKAP5Q14008 2032 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 TARSL2A2RTX5 802 aaKnown RBP18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 K7ERQ8 282 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 SLC30A4O14863 429 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 MID1O15344 667 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 LRIG2O94898 1065 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 GYPCP04921 128 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 PLEKP08567 350 aaPredicted RBP18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 ZBED6P86452 979 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 ZBTB16Q05516 673 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 ARID5BQ14865 1188 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 DLG2Q15700 870 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 CST6Q15828 149 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 SYCP2LQ5T4T6 812 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 STPG1Q5TH74 334 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 DCAF12L1Q5VU92 463 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 HGSNATQ68CP4 663 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 PLEKHA7Q6IQ23 1121 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 PPP1R2P3Q6NXS1 205 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 Q6ZVU0 165 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 TMC6Q7Z403 805 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 SLFN11Q7Z7L1 901 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 SNX19Q92543 992 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 FOXJ1Q92949 421 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 VCPIP1Q96JH7 1222 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 C2orf49Q9BVC5 232 aaPredicted RBP18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 TRIM7Q9C029 511 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 MIR1-1HGQ9H1L0 117 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 OSBPL2Q9H1P3 480 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 C6orf106Q9H6K1 298 aaPredicted RBP18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 NDFIP2Q9NV92 336 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 MYO1AQ9UBC5 1043 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 PPARGC1AQ9UBK2 798 aaKnown RBP18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 ZNF212Q9UDV6 495 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 CNOT8Q9UFF9 292 aaKnown RBP18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 CAPN11Q9UMQ6 739 aa18.63■□□□□ 0.57
PTPRN2-204ENST00000404321 A0A1W2PP55 124 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 CBX4O00257 560 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 RTN2O75298 545 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 SDHBP21912 280 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 PSMA2P25787 234 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 CASP14P31944 242 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 MAPK8P45983 427 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 KRT83P78385 493 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 EFHC2Q5JST6 749 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 MANEALQ5VSG8 457 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 SH2D3CQ8N5H7 860 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 DCAF4L2Q8NA75 395 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 ATP11CQ8NB49 1132 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 RTKNQ9BST9 563 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 NUSAP1Q9BXS6 441 aaKnown RBP18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 BTBD1Q9H0C5 482 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 GPATCH2LQ9NWQ4 482 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 FBXL12Q9NXK8 326 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 ADAMTS1Q9UHI8 967 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 DNAI1Q9UI46 699 aa18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 LUC7L2Q9Y383 392 aaKnown RBP18.62■□□□□ 0.57
PTPRN2-204ENST00000404321 DNAH14Q0VDD8 3507 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms