RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 FAM110CQ1W6H9 321 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 STRIP1Q5VSL9 837 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 VSTM1Q6UX27 236 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 TFAP2DQ7Z6R9 452 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 CPOQ8IVL8 374 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 PNISRQ8TF01 805 aaKnown RBP5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 ASB12Q8WXK4 309 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 SDCCAG3Q96C92 435 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 HERC2P3Q9BVR0 1158 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 RNF26Q9BY78 433 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 NUAK2Q9H093 628 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 RIC8AQ9NPQ8 531 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 GGA3Q9NZ52 723 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 C9orf78Q9NZ63 289 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 COPG1Q9Y678 874 aaKnown RBP5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 LTBP4Q8N2S1 1624 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 TMEM94Q12767 1356 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 KTN1Q86UP2 1357 aaKnown RBP5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 ANKRD36BQ8N2N9 1353 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 NPC1L1Q9UHC9 1359 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 SPATA31A6Q5VVP1 1343 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 MANSC4A6NHS7 340 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 RRN3P2A6NIE6 340 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 TTC34A8MYJ7 566 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 UBE2Q2LH0YL09 131 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 NCAM2O15394 837 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 ALDOAP04075 364 aaKnown RBP5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 POLBP06746 335 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 CYP2A6P11509 494 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 PAX3P23760 479 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 IDUAP35475 653 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 PAPOLAP51003 745 aaKnown RBP5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBRG1Q3YBR2 411 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 ZNF484Q5JVG2 852 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 SLC39A5Q6ZMH5 540 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 ZNF782Q6ZMW2 699 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 TMEM57Q8N5G2 664 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 LINS1Q8NG48 757 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 SLC2A12Q8TD20 617 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 CELF1Q92879 486 aaKnown RBP5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 ARRDC3Q96B67 414 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 ASB2Q96Q27 587 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 EFHD1Q9BUP0 239 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 PRDM16Q9HAZ2 1276 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 ARL8BQ9NVJ2 186 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 BAG5Q9UL15 447 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 GTF2A1LQ9UNN4 478 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 DERAQ9Y315 318 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 CPSF1Q10570 1443 aaKnown RBP5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 BRD4O60885 1362 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 USP54Q70EL1 1684 aa5.53□□□□□ -1.52
HMGB3P19-201ENST00000403971 CD163L1Q9NR16 1453 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZNF335Q9H4Z2 1342 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 NRKQ7Z2Y5 1582 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 PPIP5K1Q6PFW1 1433 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 CYP3A7-CYP3A51PA0A087WV96 503 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 PRRT4C9JH25 899 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 TMEM232C9JQI7 657 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 GRM8O00222 908 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 TFRCP02786 760 aaKnown RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 CSF1P09603 554 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 RFPL3SP0C7P2 107 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 LYL1P12980 280 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 CYP3A7P24462 503 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZNF84P51523 738 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 HMGA2P52926 109 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 CERKLQ49MI3 558 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZNF788Q6ZQV5 615 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 RD3Q7Z3Z2 195 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 ANKS1BQ7Z6G8 1248 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 ADGRF3Q8IZF5 1079 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 KTI12Q96EK9 354 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 ZNF845Q96IR2 970 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 PIGSQ96S52 555 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 CLPBQ9H078 707 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 OSBPL5Q9H0X9 879 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 PANK3Q9H999 370 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 PDE11AQ9HCR9 933 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 MLXIPLQ9NP71 852 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 TERF2IPQ9NYB0 399 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 DNAJC16Q9Y2G8 782 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 LRRFIP2Q9Y608 721 aaKnown RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 SIRT4Q9Y6E7 314 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 MAP2P11137 1827 aaKnown RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 POLR3AO14802 1390 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 MSH6P52701 1360 aa5.52□□□□□ -1.53
HMGB3P19-201ENST00000403971 IQSEC2Q5JU85 1478 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 C3orf70A6NLC5 250 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 PROP1O75360 226 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 AGR2O95994 175 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 CHRM5P08912 532 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 ALDOCP09972 364 aaKnown RBP5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 ACP5P13686 325 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 CHN1P15882 459 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 IGFBP2P18065 325 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 YPEL5P62699 121 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 TUBA4AP68366 448 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 B4GALNT1Q00973 533 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 DMWDQ09019 674 aa5.51□□□□□ -1.53
HMGB3P19-201ENST00000403971 SLC12A1Q13621 1099 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms