RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 GMPRP36959 345 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 PGFP49763 221 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 PCLAFQ15004 111 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 CCSAPQ6IQ19 270 aaPredicted RBP17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 CMC1Q7Z7K0 106 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 AZIN2Q96A70 460 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 ZIC5Q96T25 663 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 CHRAC1Q9NRG0 131 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 SNX15Q9NRS6 342 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 TRMT13Q9NUP7 481 aaKnown RBP17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 NOP53Q9NZM5 478 aaKnown RBP17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 ADAM28Q9UKQ2 775 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 GSC2O15499 205 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 F7P08709 466 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 CCND3P30281 292 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 SPRP35270 261 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 MAGEA12P43365 314 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 LIMK2P53671 638 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 SLC5A3P53794 718 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 COG7P83436 770 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 PRKCZQ05513 592 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 PRPSAP1Q14558 356 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 HSP90AA5PQ58FG0 334 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 ARHGAP36Q6ZRI8 547 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 RINLQ6ZS11 566 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 OTOP3Q7RTS5 596 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 ZNF598Q86UK7 904 aaKnown RBP17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 USP33Q8TEY7 942 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 ISL2Q96A47 359 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 ATXN7L3BQ96GX2 97 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 IL22Q9GZX6 179 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 ABCC13Q9NSE7 274 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 PPARGC1AQ9UBK2 798 aaKnown RBP17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 SFMBT1Q9UHJ3 866 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 PTPRDP23468 1912 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 DFFAO00273 331 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 TNFRSF10BO14763 440 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 GYG2O15488 501 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 PEX11AO75192 247 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 LYPLA1O75608 230 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 TYMPP19971 482 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 GRIK1P39086 918 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 ZNF33AQ06730 810 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 WASHC2DQ5SRD0 308 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 BTBD8Q5XKL5 378 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 FSTL4Q6MZW2 842 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 SPATA2LQ8IUW3 424 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 C10orf107Q8IVU9 208 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 TSGA13Q96PP4 275 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 HAPLN3Q96S86 360 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 DENND2DQ9H6A0 471 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 ZNF358Q9NW07 568 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 TAS2R1Q9NYW7 299 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 NKX1-2Q9UD57 310 aaPredicted RBP17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 MCM8Q9UJA3 840 aa17.3■□□□□ 0.36
DNMT3A-205ENST00000402667 E2F8A0AVK6 867 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 CAPN14A8MX76 684 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 CACNG3O60359 315 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 PAGE1O75459 146 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 SKIP12755 728 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 SLC1A6P48664 564 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 BRMS1LQ5PSV4 323 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 NAPEPLDQ6IQ20 393 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 ARHGAP12Q8IWW6 846 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 ZNF778Q96MU6 729 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 SOX13Q9UN79 622 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 RPL26L1Q9UNX3 145 aaKnown RBP17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 NLRC5Q86WI3 1866 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 MSI1O43347 362 aaKnown RBP17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 CCNCP24863 283 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 SERPINB8P50452 374 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 YWHAHQ04917 246 aaPredicted RBP17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 CDH17Q12864 832 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 TRIM71Q2Q1W2 868 aaKnown RBP17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 SCD5Q86SK9 330 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 KCNMB4Q86W47 210 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 TREML1Q86YW5 311 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 PIWIL2Q8TC59 973 aaKnown RBP17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 CASP10Q92851 521 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 EBF4Q9BQW3 602 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 RNPEPL1Q9HAU8 725 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 C20orf96Q9NUD7 363 aaPredicted RBP17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 COPG2Q9UBF2 871 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 NOD1Q9Y239 953 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 DNAJC16Q9Y2G8 782 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 C15orf41Q9Y2V0 281 aa17.29■□□□□ 0.36
DNMT3A-205ENST00000402667 TTC3P53804 2025 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 ARHGEF37A1IGU5 675 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 SERPINE1P05121 402 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 OR4Q2P0C623 313 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 NMBRP28336 390 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 CCR1P32246 355 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 ABCG1P45844 678 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 TM4SF4P48230 202 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 FAM26DQ5JW98 314 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 RFWD3Q6PCD5 774 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 C4orf50Q6ZRC1 276 aa17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 WDR75Q8IWA0 830 aaKnown RBP17.28■□□□□ 0.36
DNMT3A-205ENST00000402667 KLHDC8BQ8IXV7 354 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms