RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 RPL10LQ96L21 214 aaKnown RBP19.71■□□□□ 0.75
RTN4-207ENST00000402434 PEBP4Q96S96 227 aa19.71■□□□□ 0.75
RTN4-207ENST00000402434 PSMB7Q99436 277 aa19.71■□□□□ 0.75
RTN4-207ENST00000402434 MUC3BQ9H195 1237 aa19.71■□□□□ 0.75
RTN4-207ENST00000402434 TMEM248Q9NWD8 314 aa19.71■□□□□ 0.75
RTN4-207ENST00000402434 FRYLO94915 3013 aa19.71■□□□□ 0.75
RTN4-207ENST00000402434 PLXND1Q9Y4D7 1925 aa19.71■□□□□ 0.75
RTN4-207ENST00000402434 ZNF292O60281 2723 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 TTC34A8MYJ7 566 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 EIF3CLB5ME19 914 aaKnown RBP19.7■□□□□ 0.74
RTN4-207ENST00000402434 MAPKAPK2P49137 400 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 STK19P49842 368 aaPredicted RBP19.7■□□□□ 0.74
RTN4-207ENST00000402434 LPAL2Q16609 132 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 ERMARDQ5T6L9 678 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 RWDD4Q6NW29 188 aaKnown RBP19.7■□□□□ 0.74
RTN4-207ENST00000402434 PSTKQ8IV42 348 aaKnown RBP19.7■□□□□ 0.74
RTN4-207ENST00000402434 FRMD1Q8N878 549 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 DCAF4L2Q8NA75 395 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 LOXL4Q96JB6 756 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 SPACA7Q96KW9 195 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 EIF3CQ99613 913 aaKnown RBP19.7■□□□□ 0.74
RTN4-207ENST00000402434 C2orf49Q9BVC5 232 aaPredicted RBP19.7■□□□□ 0.74
RTN4-207ENST00000402434 PACSIN1Q9BY11 444 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 USP18Q9UMW8 372 aa19.7■□□□□ 0.74
RTN4-207ENST00000402434 TARSL2A2RTX5 802 aaKnown RBP19.69■□□□□ 0.74
RTN4-207ENST00000402434 RETP07949 1114 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 H2AFZP0C0S5 128 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 BCKDHBP21953 392 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 HTR7P34969 479 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 NNMTP40261 264 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 NUMBP49757 651 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 KRT83P78385 493 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 C9orf64Q5T6V5 341 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 H2AFVQ71UI9 128 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 FRS2Q8WU20 508 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 CTNNBL1Q8WYA6 563 aaPredicted RBP19.69■□□□□ 0.74
RTN4-207ENST00000402434 SIPA1Q96FS4 1042 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 MTG2Q9H4K7 406 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 ITM2CQ9NQX7 267 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 NDFIP2Q9NV92 336 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 USP36Q9P275 1121 aaKnown RBP19.69■□□□□ 0.74
RTN4-207ENST00000402434 PCSK1NQ9UHG2 260 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 IP6K2Q9UHH9 426 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 MBD1Q9UIS9 605 aaPredicted RBP19.69■□□□□ 0.74
RTN4-207ENST00000402434 ANAPC7Q9UJX3 599 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 AP4E1Q9UPM8 1137 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 HS3ST2Q9Y278 367 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 CHD5Q8TDI0 1954 aa19.69■□□□□ 0.74
RTN4-207ENST00000402434 GON4LQ3T8J9 2241 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 ATP9BO43861 1147 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 PRPSAP2O60256 369 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 EPHB2P29323 1055 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 GNA12Q03113 381 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 ELF2Q15723 593 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 PMS2CLQ68D20 193 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.68■□□□□ 0.74
RTN4-207ENST00000402434 PRCCQ92733 491 aaPredicted RBP19.68■□□□□ 0.74
RTN4-207ENST00000402434 PTPRN2Q92932 1015 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 EPAS1Q99814 870 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 SNRNP25Q9BV90 132 aaKnown RBP19.68■□□□□ 0.74
RTN4-207ENST00000402434 RSPH9Q9H1X1 276 aaPredicted RBP19.68■□□□□ 0.74
RTN4-207ENST00000402434 SPTLC3Q9NUV7 552 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 UVRAGQ9P2Y5 699 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 VPS51Q9UID3 782 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 SLC25A13Q9UJS0 675 aa19.68■□□□□ 0.74
RTN4-207ENST00000402434 IGHV1OR15-9A0A0B4J2B8 117 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 EDDM13A0A1B0GTR0 161 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 CXorf51AA0A1B0GTR3 108 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 WASH4PA8MWX3 477 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 MYO1FO00160 1098 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 CREB3O43889 395 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 SNAP91O60641 907 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 SIN3BO75182 1162 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 ZMPSTE24O75844 475 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 RHOBTB1O94844 696 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 IGLV3-19P01714 112 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 TMEM253P0C7T8 217 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 ZBTB16Q05516 673 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 CA9Q16790 459 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 SPDYCQ5MJ68 293 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 KIAA1324Q6UXG2 1013 aaKnown RBP19.67■□□□□ 0.74
RTN4-207ENST00000402434 RTL3Q8N8U3 475 aaKnown RBP19.67■□□□□ 0.74
RTN4-207ENST00000402434 OR7D4Q8NG98 312 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 BTBD6Q96KE9 485 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 ACE2Q9BYF1 805 aaPredicted RBP19.67■□□□□ 0.74
RTN4-207ENST00000402434 DHX35Q9H5Z1 703 aaKnown RBP19.67■□□□□ 0.74
RTN4-207ENST00000402434 GPATCH2LQ9NWQ4 482 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 NCDNQ9UBB6 729 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 DNAI1Q9UI46 699 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 GMEB2Q9UKD1 530 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 MT-CO1P00395 513 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 IL1R2P27930 398 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 ETFBP38117 255 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 BOLA3Q53S33 107 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 DAB2IPQ5VWQ8 1189 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 SLC36A4Q6YBV0 504 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 DCLK2Q8N568 766 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 SH2D3CQ8N5H7 860 aa19.67■□□□□ 0.74
RTN4-207ENST00000402434 ZNF564Q8TBZ8 553 aaPredicted RBP19.67■□□□□ 0.74
RTN4-207ENST00000402434 ARHGEF2Q92974 986 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms