RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 INHBEP58166 350 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 BBS12Q6ZW61 710 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 FIG4Q92562 907 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 TADA1Q96BN2 335 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 SENP6Q9GZR1 1112 aaPredicted RBP18.49■□□□□ 0.55
COL18A1-204ENST00000400337 USE1Q9NZ43 259 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 ZNF112Q9UJU3 913 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 REXO2Q9Y3B8 237 aaKnown RBP18.49■□□□□ 0.55
COL18A1-204ENST00000400337 ROBO3Q96MS0 1386 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 KIF1AQ12756 1690 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 YDJCA8MPS7 323 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 ATP4AP20648 1035 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 IRX1P78414 480 aaPredicted RBP18.49■□□□□ 0.55
COL18A1-204ENST00000400337 ACOX1Q15067 660 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 FOXR1Q6PIV2 292 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 ABHD15Q6UXT9 468 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 UNC5AQ6ZN44 842 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 GPR141Q7Z602 305 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 CACUL1Q86Y37 369 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 MCOLN3Q8TDD5 553 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 HELQQ8TDG4 1101 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 CAMKK2Q96RR4 588 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 CLDN5O00501 218 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 MRASO14807 208 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 ARF4P18085 180 aaPredicted RBP18.49■□□□□ 0.55
COL18A1-204ENST00000400337 ALDH9A1P49189 494 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 CCT8P50990 548 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 IKBKEQ14164 716 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 HSDL1Q3SXM5 330 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 ART4Q93070 314 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 UROC1Q96N76 676 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 SIKE1Q9BRV8 207 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 CATSPERZQ9NTU4 200 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 RIPK3Q9Y572 518 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 MYOM1P52179 1685 aa18.49■□□□□ 0.55
COL18A1-204ENST00000400337 KPNA3O00505 521 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-204ENST00000400337 CD52P31358 61 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 C10orf53Q8N6V4 93 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 VPS33AQ96AX1 596 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 PDZK1P1A8MUH7 402 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 PIAS1O75925 651 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 PDE5AO76074 875 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 ABCB1P08183 1280 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-204ENST00000400337 ILF2Q12905 390 aaKnown RBP18.48■□□□□ 0.55
COL18A1-204ENST00000400337 PPP1R26Q5T8A7 1209 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-204ENST00000400337 DUPD1Q68J44 220 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 ACADMP11310 421 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 PBX1P40424 430 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 GRM5P41594 1212 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 WASHC2DQ5SRD0 308 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 FAM126BQ8IXS8 530 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 ATG16L2Q8NAA4 619 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 ZNF670Q9BS34 389 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 PCDHA11Q9Y5I1 949 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 A0A087X1B8 175 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 CCNB1P14635 433 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 CRYBB1P53674 252 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-204ENST00000400337 MAD2L1Q13257 205 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-204ENST00000400337 OASLQ15646 514 aaKnown RBP18.48■□□□□ 0.55
COL18A1-204ENST00000400337 DNAJC14Q6Y2X3 702 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-204ENST00000400337 POLNQ7Z5Q5 900 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 CERS2Q96G23 380 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 NSMCE2Q96MF7 247 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 ZFP42Q96MM3 310 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 NFKBIZQ9BYH8 718 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 COMMD8Q9NX08 183 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 SPG21Q9NZD8 308 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 INPP4BO15327 924 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 IFNA14P01570 189 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 FCGR1AP12314 374 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 CKAP2Q8WWK9 683 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 ALG3Q92685 438 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 LGMNQ99538 433 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 SNX8Q9Y5X2 465 aa18.48■□□□□ 0.55
COL18A1-204ENST00000400337 MRC1P22897 1456 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 NOMO2Q5JPE7 1267 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 C12orf56Q8IXR9 622 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 KREMEN1Q96MU8 473 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 PANX3Q96QZ0 392 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 HGH1Q9BTY7 390 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 ZC4H2Q9NQZ6 224 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 THG1LQ9NWX6 298 aaKnown RBP18.47■□□□□ 0.55
COL18A1-204ENST00000400337 TRPC4Q9UBN4 977 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 XYLBO75191 536 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 KRT8P05787 483 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 FASP25445 335 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 CAPZA2P47755 286 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 RD3Q7Z3Z2 195 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 DHFR2Q86XF0 187 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 MAGED4Q96JG8 741 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 ZCCHC2Q9C0B9 1178 aaKnown RBP18.47■□□□□ 0.55
COL18A1-204ENST00000400337 ALG9Q9H6U8 611 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 TDRKHQ9Y2W6 561 aaKnown RBP18.47■□□□□ 0.55
COL18A1-204ENST00000400337 CCDC154A6NI56 674 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 FSCN2O14926 492 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 DARSP14868 501 aaKnown RBP18.47■□□□□ 0.55
COL18A1-204ENST00000400337 MRPL28Q13084 256 aaKnown RBP18.47■□□□□ 0.55
COL18A1-204ENST00000400337 PABPC1LQ4VXU2 614 aaKnown RBP18.47■□□□□ 0.55
COL18A1-204ENST00000400337 HECTD3Q5T447 861 aa18.47■□□□□ 0.55
COL18A1-204ENST00000400337 PLEKHM3Q6ZWE6 761 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms