RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CAPSQ13938 189 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 NEDD8Q15843 81 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 ADRM1Q16186 407 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 CHST15Q7LFX5 561 aaPredicted RBP17.43■□□□□ 0.38
PTPRA-205ENST00000399903 THNSL1Q8IYQ7 743 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 KBTBD7Q8WVZ9 684 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 NTPCRQ9BSD7 190 aaKnown RBP17.43■□□□□ 0.38
PTPRA-205ENST00000399903 RLFQ13129 1914 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 CCDC78A2IDD5 438 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 EXTL3O43909 919 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 CHRNGP07510 517 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 CCDC130P13994 396 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 MPSTP25325 297 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 TRAF2Q12933 501 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 FAM102AQ5T9C2 384 aaPredicted RBP17.42■□□□□ 0.38
PTPRA-205ENST00000399903 KCNT2Q6UVM3 1135 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 RNF149Q8NC42 400 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 AGAP3Q96P47 875 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 BCAP29Q9UHQ4 241 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 CDH3P22223 829 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 TRPC3Q13507 836 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 WDTC1Q8N5D0 677 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 CASP10Q92851 521 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 PLEKHA8Q96JA3 519 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 FERMT1Q9BQL6 677 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 HEPHQ9BQS7 1158 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 PLAC1Q9HBJ0 212 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 TBCCD1Q9NVR7 557 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 AKAP10O43572 662 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 ERVK-10P10266 1014 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 HSPA13P48723 471 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 PTK2BQ14289 1009 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 XRRA1Q6P2D8 792 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 ZBTB49Q6ZSB9 765 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.42■□□□□ 0.38
PTPRA-205ENST00000399903 VPS50Q96JG6 964 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 MTMR12Q9C0I1 747 aa17.42■□□□□ 0.38
PTPRA-205ENST00000399903 CHADO15335 359 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 ATE1O95260 518 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 PDCD4Q53EL6 469 aaKnown RBP17.41■□□□□ 0.38
PTPRA-205ENST00000399903 FGD3Q5JSP0 725 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 TMEM214Q6NUQ4 689 aaKnown RBP17.41■□□□□ 0.38
PTPRA-205ENST00000399903 PORCNQ9H237 461 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 CAB39LQ9H9S4 337 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 DNAJC28Q9NX36 388 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 COPG2Q9UBF2 871 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 AURKCQ9UQB9 309 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 AP4S1Q9Y587 144 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 MAFBQ9Y5Q3 323 aaPredicted RBP17.41■□□□□ 0.38
PTPRA-205ENST00000399903 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 DOCK1Q14185 1865 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 KANSL1LA0AUZ9 987 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 B4GALT5O43286 388 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 METTL18O95568 372 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 TBXAS1P24557 533 aaPredicted RBP17.41■□□□□ 0.38
PTPRA-205ENST00000399903 POLR2BP30876 1174 aaKnown RBP17.41■□□□□ 0.38
PTPRA-205ENST00000399903 GLRBP48167 497 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 CLCN3P51790 818 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 RPL26P61254 145 aaKnown RBP17.41■□□□□ 0.38
PTPRA-205ENST00000399903 NR1D2Q14995 579 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 ZFP1Q6P2D0 407 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 TMEM26Q6ZUK4 368 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 CYGBQ8WWM9 190 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 NAA50Q9GZZ1 169 aaKnown RBP17.41■□□□□ 0.38
PTPRA-205ENST00000399903 SLC38A7Q9NVC3 462 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 SEPT10Q9P0V9 454 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 TIPRLO75663 272 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 TSHRP16473 764 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 CD247P20963 164 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 PRKCHP24723 683 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 BCAP31P51572 246 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 CSE1LP55060 971 aaKnown RBP17.41■□□□□ 0.38
PTPRA-205ENST00000399903 DLG2Q15700 870 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 TMEM110Q86TL2 294 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 RDM1Q8NG50 284 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 RSPH1Q8WYR4 309 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 FBXL18Q96ME1 805 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 CDY2AQ9Y6F7 541 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 CDY1Q9Y6F8 540 aa17.41■□□□□ 0.38
PTPRA-205ENST00000399903 RGSL1A5PLK6 1076 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 FAM149AA5PLN7 773 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 MATN2O00339 956 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 GSRP00390 522 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 ATP5BP06576 529 aaKnown RBP17.4■□□□□ 0.38
PTPRA-205ENST00000399903 GNAO1P09471 354 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 DPP6P42658 865 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 SERPINB9P50453 376 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 CDH8P55286 799 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 CYP2A13Q16696 494 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 ZNF423Q2M1K9 1284 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 NAPRTQ6XQN6 538 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 CDKL2Q92772 493 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 EBNA1BP2Q99848 306 aaKnown RBP17.4■□□□□ 0.38
PTPRA-205ENST00000399903 ADPGKQ9BRR6 497 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 DHX33Q9H6R0 707 aaKnown RBP17.4■□□□□ 0.38
PTPRA-205ENST00000399903 RSAD1Q9HA92 442 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 RNF19AQ9NV58 838 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 TRDMT1O14717 391 aaKnown RBP17.4■□□□□ 0.38
PTPRA-205ENST00000399903 PRPSAP2O60256 369 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 PERM1Q5SV97 790 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms