RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ABATP80404 500 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 ADIGQ0VDE8 80 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 PHYKPLQ8IUZ5 450 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 CACTIN-AS1Q8N1I8 211 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 E2F7Q96AV8 911 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 ELOVL4Q9GZR5 314 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 FANCFQ9NPI8 374 aa11.16□□□□□ -0.62
CACNA1C-216ENST00000399638 SLC15A5A6NIM6 579 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 H3BQF6 201 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 ZBTB14O43829 449 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 CD52P31358 61 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SOX6P35712 828 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 CNGA3Q16281 694 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 RNASE12Q5GAN4 147 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SLC9A6Q92581 669 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 LPPQ93052 612 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 CYP4F12Q9HCS2 524 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 CCDC177Q9NQR7 707 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 A0A1W2PRG6 482 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 BHMG1C9JSJ3 638 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SERPINF2P08697 491 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 AXLP30530 894 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 DEFA1P59665 94 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 DEFA3P59666 94 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 FIGNQ5HY92 759 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 MARC1Q5VT66 337 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SLC27A1Q6PCB7 646 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 CRTC3Q6UUV7 619 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 ANKFN1Q8N957 763 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 ANKZF1Q9H8Y5 726 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 PDXKO00764 312 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 ZNF682O95780 498 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 IFNA14P01570 189 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 LBPP18428 481 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 CDC25CP30307 473 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 NFIAQ12857 509 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 MAPK11Q15759 364 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 CNSTQ6PJW8 725 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 RAD9BQ6WBX8 426 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SAPCD2Q86UD0 394 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 FAM131BQ86XD5 332 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 ZNF563Q8TA94 476 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SERPINB11Q96P15 392 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 CLEC4MQ9H2X3 399 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 JMJD4Q9H9V9 463 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 ING3Q9NXR8 418 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 MAT2BQ9NZL9 334 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 PCDHB3Q9Y5E6 796 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 RIC1Q4ADV7 1423 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 ERI2A8K979 691 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 H3BMM5 538 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 PER2O15055 1255 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 FOXN1O15353 648 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 INHAP05111 366 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SMIM10L2AP0DMW4 78 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SMIM10L2BP0DMW5 78 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SERPINB9P50453 376 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 EPS8Q12929 822 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 CBWD6Q4V339 395 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 MICU2Q8IYU8 434 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 TTC29Q8NA56 475 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 REPS2Q8NFH8 660 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 VPS33AQ96AX1 596 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 UROC1Q96N76 676 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 QKIQ96PU8 341 aaKnown RBP eCLIP11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 ETNK1Q9HBU6 452 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 TBC1D13Q9NVG8 400 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 SCN3BQ9NY72 215 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 KCND2Q9NZV8 630 aa11.15□□□□□ -0.62
CACNA1C-216ENST00000399638 IGF2BP3O00425 579 aaKnown RBP eCLIP11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 SCAMP1O15126 338 aa11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 ATG7O95352 703 aa11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 EPHX1P07099 455 aa11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 ANXA6P08133 673 aa11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 FMO5P49326 533 aa11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF200P98182 395 aaPredicted RBP11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 OCLNQ16625 522 aa11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 PRUNE1Q86TP1 453 aa11.15□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF7P17097 686 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 BST2Q10589 180 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 CSTF3Q12996 717 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 IRGCQ6NXR0 463 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 GALNT7Q86SF2 657 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 LZTR1Q8N653 840 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 TRPC4APQ8TEL6 797 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 FAM172AQ8WUF8 416 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 DHRS1Q96LJ7 313 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 TRIM9Q9C026 710 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 GPRC5DQ9NZD1 345 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 MARCOQ9UEW3 520 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 SHOC2Q9UQ13 582 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 A0A0B4J269 797 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 TPP2P29144 1249 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 RPL9P32969 192 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 CCT3P49368 545 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 STX4Q12846 297 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms