RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ZFP42Q96MM3 310 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 MLPHQ9BV36 600 aaPredicted RBP19.94■□□□□ 0.78
COL13A1-205ENST00000398978 RHOBTB2Q9BYZ6 727 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 MROH8Q9H579 483 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 SSX2IPQ9Y2D8 614 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 FIS1Q9Y3D6 152 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 A0A1B0GVG6 124 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 CCNT2O60583 730 aaKnown RBP19.94■□□□□ 0.78
COL13A1-205ENST00000398978 NFKB1P19838 968 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 GJA5P36382 358 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 GLUD2P49448 558 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 CDK18Q07002 472 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 NXNQ6DKJ4 435 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 PGM2L1Q6PCE3 622 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 PAQR9Q6ZVX9 377 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 SNX32Q86XE0 403 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 SIX6OS1Q8N1H7 587 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 LRRC52Q8N7C0 313 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 CMTM5Q96DZ9 223 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 APBA2Q99767 749 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 TASP1Q9H6P5 420 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 PCDHGB4Q9UN71 923 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 PCDHGB5Q9Y5G0 923 aa19.94■□□□□ 0.78
COL13A1-205ENST00000398978 CAPN8A6NHC0 703 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 MEIS3P2A8K0S8 358 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 STX16-NPEPL1H3BU86 382 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 PIRO00625 290 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 SNAI1O95863 264 aaPredicted RBP19.93■□□□□ 0.78
COL13A1-205ENST00000398978 GRTP1Q5TC63 336 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 CYS1Q717R9 158 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 OTOP3Q7RTS5 596 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 ANKRD13AQ8IZ07 590 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 ACTRT2Q8TDY3 377 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 SGF29Q96ES7 293 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 CDCA5Q96FF9 252 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 SCYL1Q96KG9 808 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 ULBP1Q9BZM6 244 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 TRIM4Q9C037 500 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 BFARQ9NZS9 450 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 PCDHB12Q9Y5F1 795 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 BRCA1P38398 1863 aaKnown RBP19.93■□□□□ 0.78
COL13A1-205ENST00000398978 PLXNA1Q9UIW2 1896 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 ZNF487B1APH4 448 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 HUS1O60921 280 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 FYNP06241 537 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 SPRP35270 261 aaPredicted RBP19.93■□□□□ 0.78
COL13A1-205ENST00000398978 GRM3Q14832 879 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 KCNMB4Q86W47 210 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 PSTKQ8IV42 348 aaKnown RBP19.93■□□□□ 0.78
COL13A1-205ENST00000398978 CATSPER2Q96P56 530 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 OMDQ99983 421 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 LRRC40Q9H9A6 602 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 NMRAL1Q9HBL8 299 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 TMEM30AQ9NV96 361 aa19.93■□□□□ 0.78
COL13A1-205ENST00000398978 SF3B1O75533 1304 aaKnown RBP eCLIP19.93■□□□□ 0.78
COL13A1-205ENST00000398978 GPR32O75388 356 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 USP17L7P0C7H9 530 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 TCN1P20061 433 aaPredicted RBP19.92■□□□□ 0.78
COL13A1-205ENST00000398978 GRIA2P42262 883 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 SERPINB8P50452 374 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 LIMK2P53671 638 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 TPI1P60174 286 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 DPYSQ14117 519 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 NOTUMQ6P988 496 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 EPGNQ6UW88 154 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 FBXW8Q8N3Y1 598 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 OR6J1Q8NGC5 347 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 PPP2R3CQ969Q6 453 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 NPY6RQ99463 290 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 UBQLN1Q9UMX0 589 aaKnown RBP19.92■□□□□ 0.78
COL13A1-205ENST00000398978 SORCS3Q9UPU3 1222 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 TMEM233B4DJY2 109 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 DCLK1O15075 740 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 SPANXN3Q5MJ09 141 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 STXBP5Q5T5C0 1151 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 FBXL19Q6PCT2 694 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 CLEC20AQ6ZU45 233 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 FAM156AQ8NDB6 213 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 HSFY1Q96LI6 401 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 KLHL4Q9C0H6 718 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 PLEKHA5Q9HAU0 1116 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 TCF7L2Q9NQB0 619 aa19.92■□□□□ 0.78
COL13A1-205ENST00000398978 MYOCOSA0A1B0GUC4 107 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 CXCL11O14625 94 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 JCHAINP01591 159 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 MMP3P08254 477 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 NCAM1P13591 858 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 TAF6P49848 677 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 AFF1P51825 1210 aaKnown RBP19.91■□□□□ 0.78
COL13A1-205ENST00000398978 NAGLUP54802 743 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 MPP3Q13368 585 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 PDCD2Q16342 344 aaPredicted RBP19.91■□□□□ 0.78
COL13A1-205ENST00000398978 CWF19L1Q69YN2 538 aaKnown RBP19.91■□□□□ 0.78
COL13A1-205ENST00000398978 SPATA22Q8NHS9 363 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 KCTD4Q8WVF5 259 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 VPS39Q96JC1 886 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 DUSP16Q9BY84 665 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 GTF2IRD1Q9UHL9 959 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 INPP5FQ9Y2H2 1132 aa19.91■□□□□ 0.78
COL13A1-205ENST00000398978 LTBP3Q9NS15 1303 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms