RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CUL3Q13618 768 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 CLEC14AQ86T13 490 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 OSTM1Q86WC4 334 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 WNT8BQ93098 351 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 TUBGCP5Q96RT8 1024 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 EBF3Q9H4W6 596 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 POMPQ9Y244 141 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 DOCK3Q8IZD9 2030 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 A0A096LPK6 155 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 FAM72CH0Y354 149 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 CLDN5O00501 218 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 KIF3CO14782 793 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 PRDX6P30041 224 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 PAPOLAP51003 745 aaKnown RBP26.12■■□□□ 1.77
COL13A1-203ENST00000398969 IRF9Q00978 393 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 FSCBQ5H9T9 825 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 FAM72AQ5TYM5 149 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 FAM72DQ6L9T8 149 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 FAM72BQ86X60 149 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 SLC2A13Q96QE2 648 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 CAB39LQ9H9S4 337 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 MAN1C1Q9NR34 630 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 BFARQ9NZS9 450 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 ADAMTS6Q9UKP5 1117 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 ZNF236Q9UL36 1845 aa26.12■■□□□ 1.77
COL13A1-203ENST00000398969 MPOP05164 745 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 COX4I1P13073 169 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 SOX4Q06945 474 aaPredicted RBP26.11■■□□□ 1.77
COL13A1-203ENST00000398969 FRG1Q14331 258 aaKnown RBP26.11■■□□□ 1.77
COL13A1-203ENST00000398969 DLG2Q15700 870 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 DGKDQ16760 1214 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 SLC9B1Q4ZJI4 515 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 CFAP157Q5JU67 520 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 RNF169Q8NCN4 708 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 CASS4Q9NQ75 786 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 MANSC4A6NHS7 340 aaPredicted RBP26.11■■□□□ 1.77
COL13A1-203ENST00000398969 TMEM114B3SHH9 223 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 HUS1O60921 280 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 ZMPSTE24O75844 475 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 NPR3P17342 541 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 ERCC2P18074 760 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 TBL3Q12788 808 aaKnown RBP26.11■■□□□ 1.77
COL13A1-203ENST00000398969 TAF1CQ15572 869 aaPredicted RBP26.11■■□□□ 1.77
COL13A1-203ENST00000398969 ANKRD20A4Q4UJ75 823 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 HFE2Q6ZVN8 426 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 HPS6Q86YV9 775 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 FBXW8Q8N3Y1 598 aa26.11■■□□□ 1.77
COL13A1-203ENST00000398969 TRPM7Q96QT4 1865 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 E9PBE3 544 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 KLHL41O60662 606 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 CAPN15O75808 1086 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 ABCG1P45844 678 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 KLF10Q13118 480 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 MAP2K5Q13163 448 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 SV2CQ496J9 727 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 HSP90AA5PQ58FG0 334 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 DNAAF3Q8N9W5 541 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 MAPK15Q8TD08 544 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 FAM192AQ9GZU8 254 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 LRRC4Q9HBW1 653 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 TSC2P49815 1807 aa26.1■■□□□ 1.77
COL13A1-203ENST00000398969 RNASEH1O60930 286 aaKnown RBP26.09■■□□□ 1.77
COL13A1-203ENST00000398969 CHRM1P11229 460 aaPredicted RBP26.09■■□□□ 1.77
COL13A1-203ENST00000398969 DARSP14868 501 aaKnown RBP26.09■■□□□ 1.77
COL13A1-203ENST00000398969 LRRC36Q1X8D7 754 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 SFT2D3Q587I9 215 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 TCHHL1Q5QJ38 904 aaPredicted RBP26.09■■□□□ 1.77
COL13A1-203ENST00000398969 PRAMEF19Q5SWL8 479 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 LPCAT4Q643R3 524 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 PAQR9Q6ZVX9 377 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 URGCPQ8TCY9 931 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 KCTD13Q8WZ19 329 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 MFSD3Q96ES6 412 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 GBP5Q96PP8 586 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 ARHGAP26Q9UNA1 814 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 WARSP23381 471 aaKnown RBP26.09■■□□□ 1.77
COL13A1-203ENST00000398969 ADRA1BP35368 520 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 KCTD11Q693B1 232 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 ACAD11Q709F0 780 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 SIX6OS1Q8N1H7 587 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 GALNT15Q8N3T1 639 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 EFCAB3Q8N7B9 438 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 RNF39Q9H2S5 420 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 ANLNQ9NQW6 1124 aa26.09■■□□□ 1.77
COL13A1-203ENST00000398969 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.08■■□□□ 1.77
COL13A1-203ENST00000398969 ZBTB24O43167 697 aaPredicted RBP26.08■■□□□ 1.77
COL13A1-203ENST00000398969 TRIM13O60858 407 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 C2P06681 752 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 KCNE1P15382 129 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 PPIDQ08752 370 aaKnown RBP26.08■■□□□ 1.77
COL13A1-203ENST00000398969 METTL21CQ5VZV1 264 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 PDZD4Q76G19 769 aaPredicted RBP26.08■■□□□ 1.77
COL13A1-203ENST00000398969 TDRD5Q8NAT2 981 aaKnown RBP26.08■■□□□ 1.77
COL13A1-203ENST00000398969 PPP1R13LQ8WUF5 828 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 KLHL4Q9C0H6 718 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 VCX3BQ9H321 246 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 NMRAL1Q9HBL8 299 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 NRCAMQ92823 1304 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 RRN3P2A6NIE6 340 aa26.08■■□□□ 1.77
COL13A1-203ENST00000398969 XPOTO43592 962 aaKnown RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms