RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 HDCP19113 662 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 HTRA3P83110 453 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 GSTA3Q16772 222 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 SDHAF4Q5VUM1 108 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 NLRP9Q7RTR0 991 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 EFCAB1Q9HAE3 211 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 RRN3Q9NYV6 651 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 UBA2Q9UBT2 640 aaPredicted RBP14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 IL1BP01584 269 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 PABPC3Q9H361 631 aaKnown RBP14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 TBL1XO60907 577 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 RBP1P09455 135 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 CPA3P15088 417 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 CYP2C18P33260 490 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 RCN1Q15293 331 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 FBXO46Q6PJ61 603 aaPredicted RBP14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 DEFB106AQ8N104 65 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 EXD1Q8NHP7 514 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 KCTD14Q9BQ13 255 aaPredicted RBP14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 CDC42EP4Q9H3Q1 356 aaKnown RBP14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 CD248Q9HCU0 757 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 WHRNQ9P202 907 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 SHOC2Q9UQ13 582 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 OPLAHO14841 1288 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 LSM8O95777 96 aaKnown RBP14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 ATP5C1P36542 298 aaKnown RBP14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 EARS2Q5JPH6 523 aaKnown RBP14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 ABHD15Q6UXT9 468 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 MTMR9Q96QG7 549 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 C10orf88Q9H8K7 445 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 MARCH2Q9P0N8 246 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 IFNA16P05015 189 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 MGAT1P26572 445 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 ICAM3P32942 547 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 GSSP48637 474 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 RAP1GAP2Q684P5 730 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 PDPK2PQ6A1A2 396 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 POMGNT2Q8NAT1 580 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 FIG4Q92562 907 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 TPD52L3Q96J77 140 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 SLC40A1Q9NP59 571 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 VPS51Q9UID3 782 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 CDH9Q9ULB4 789 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 SOX13Q9UN79 622 aa14.49□□□□□ -0.09
PCDHA11-201ENST00000398640 TYMPP19971 482 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 DEFA1P59665 94 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 DEFA3P59666 94 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 VAC14Q08AM6 782 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 KCNMA1Q12791 1236 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 RAET1GQ6H3X3 334 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 COLGALT2Q8IYK4 626 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 MCOLN3Q8TDD5 553 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 FAM120BQ96EK7 910 aaKnown RBP14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 TMEM120AQ9BXJ8 343 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 PLAGL2Q9UPG8 496 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 KLHL20Q9Y2M5 609 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 AGKQ53H12 422 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 ARMC12Q5T9G4 340 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 BNC2Q6ZN30 1099 aaPredicted RBP14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 ATG16L2Q8NAA4 619 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 GLMNQ92990 594 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 USP7Q93009 1102 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 PARVBQ9HBI1 364 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 TPBGLP0DKB5 382 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 CCND1P24385 295 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 NOS3P29474 1203 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 USP45Q70EL2 814 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 SCLYQ96I15 445 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 PAPOLBQ9NRJ5 636 aaKnown RBP14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 TBC1D23Q9NUY8 699 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 POLR1DQ9Y2S0 133 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 ENO4A6NNW6 628 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 ANKRD63C9JTQ0 380 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 FMO4P31512 558 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 GRM5P41594 1212 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 HECTD3Q5T447 861 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 SMG7Q92540 1137 aaKnown RBP14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 CDT1Q9H211 546 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 RGS18Q9NS28 235 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 OR6C75A6NL08 312 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 PTPN1P18031 435 aaKnown RBP14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 SERPINB3P29508 390 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 CDC25CP30307 473 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 CCT8P50990 548 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 DSG1Q02413 1049 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 MAGEB18Q96M61 343 aa14.48□□□□□ -0.09
PCDHA11-201ENST00000398640 SNTNA6NMZ2 147 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 NBNO60934 754 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 SNHG28P0DPA3 235 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 CRYMQ14894 314 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 TTI2Q6NXR4 508 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 BBS4Q96RK4 519 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 TCF25Q9BQ70 676 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 ULBP1Q9BZM6 244 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 SYBUQ9NX95 663 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 RAD54BQ9Y620 910 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 DLGAP3O95886 979 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 IRAK1P51617 712 aa14.47□□□□□ -0.09
PCDHA11-201ENST00000398640 ITGB3BPQ13352 177 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms