RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 RSL24D1Q9UHA3 163 aaKnown RBP11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SNX5Q9Y5X3 404 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TK2O00142 265 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 B4GALT4O60513 344 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CRTAMO95727 393 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CHRNGP07510 517 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ZNF23P17027 643 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 XRCC1P18887 633 aaPredicted RBP11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TSPAN8P19075 237 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TPSB2P20231 275 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PSMA4P25789 261 aaKnown RBP11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ETFBP38117 255 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GRIA3P42263 894 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GPD2P43304 727 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GMPSP49915 693 aaPredicted RBP11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 THOP1P52888 689 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 RALGDSQ12967 914 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TPSAB1Q15661 275 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ARL13AQ5H913 290 aaPredicted RBP11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TUBGCP3Q96CW5 907 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MFSD3Q96ES6 412 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 OR52B2Q96RD2 323 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PTTG2Q9NZH5 202 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 XPR1Q9UBH6 696 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 VTI1BQ9UEU0 232 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 DOT1LQ8TEK3 1739 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TOGARAM1Q9Y4F4 1720 aa11.33□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SPATA31A6Q5VVP1 1343 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ITGB4P16144 1822 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 STX16-NPEPL1H3BU86 382 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 HSPA1AP0DMV8 641 aaKnown RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 HSPA1BP0DMV9 641 aaKnown RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TFEBP19484 476 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MRPS5P82675 430 aaKnown RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 LSM12Q3MHD2 195 aaKnown RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CERCAMQ5T4B2 595 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 FKBP1CQ5VVH2 108 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GK5Q6ZS86 529 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SLC41A1Q8IVJ1 513 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 UBR7Q8N806 425 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ADCY4Q8NFM4 1077 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 DNERQ8NFT8 737 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 NDRG1Q92597 394 aaKnown RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MCRS1Q96EZ8 462 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CYLDQ9NQC7 956 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SYCE1LA8MT33 242 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 HACD1B0YJ81 288 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 NAB1Q13506 487 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PSTKQ8IV42 348 aaKnown RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 C1orf21Q9H246 121 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 POMKQ9H5K3 350 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PTPRHQ9HD43 1115 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PIM2Q9P1W9 311 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 HES2Q9Y543 173 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ASB3Q9Y575 518 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 COL4A1P02462 1669 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 GPR25O00155 361 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PSMD12O00232 456 aaPredicted RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CLOCKO15516 846 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MTSS1O43312 755 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MFSD11O43934 449 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PRKCHP24723 683 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TMED10P49755 219 aaKnown RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CTBP1Q13363 440 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 HSDL1Q3SXM5 330 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 DALRD3Q5D0E6 543 aaKnown RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 MTX3Q5HYI7 312 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 OTUD3Q5T2D3 398 aaPredicted RBP11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 AGAP9Q5VTM2 703 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ADGRF2Q8IZF7 708 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 FAM47BQ8NA70 645 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 NCLNQ969V3 563 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SIGLEC10Q96LC7 697 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 AGAP2Q99490 1192 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 WDCPQ9H6R7 721 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PCDHB12Q9Y5F1 795 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PSAT1Q9Y617 370 aa11.32□□□□□ -0.6
CSGALNACT1-202ENST00000397998 FAM159BA6NKW6 160 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 M0QZ92 97 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 TRIM38O00635 465 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 INPP4BO15327 924 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ALBP02768 609 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 HOXC6P09630 235 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 DHRS4L1P0CG22 281 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 DPEP1P16444 411 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 LRPAP1P30533 357 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ENPEPQ07075 957 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 CDH17Q12864 832 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 ZNF470Q6ECI4 717 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 FSTL4Q6MZW2 842 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PATL1Q86TB9 770 aaKnown RBP11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 SNX31Q8N9S9 440 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 EDEM1Q92611 657 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 PIWIL1Q96J94 861 aaKnown RBP11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 BEGAINQ9BUH8 593 aa11.31□□□□□ -0.6
CSGALNACT1-202ENST00000397998 FICDQ9BVA6 458 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms