RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TEDDM1Q5T9Z0 273 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CXCL17Q6UXB2 119 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 BHLHA9Q7RTU4 235 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 LMNTD2Q8IXW0 634 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ENDOVQ8N8Q3 282 aaKnown RBP18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 DCDC2Q9UHG0 476 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 MRPL42Q9Y6G3 142 aaKnown RBP18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 BPTFQ12830 3046 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TPH1P17752 444 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GP5P40197 560 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CCNG1P51959 295 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 MRPS35P82673 323 aaKnown RBP18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TAF2Q6P1X5 1199 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PDZD4Q76G19 769 aaPredicted RBP18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 HASPINQ8TF76 798 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 MLPHQ9BV36 600 aaPredicted RBP18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 LRRC40Q9H9A6 602 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TMEM165Q9HC07 324 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 BLOC1S6Q9UL45 172 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ZNF232Q9UNY5 417 aa18.75■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ZNF236Q9UL36 1845 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CCDC78A2IDD5 438 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PRR5-ARHGAP8B1AHC4 643 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 C9IYK1 514 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 NFKB1P19838 968 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PTDSS1P48651 473 aaKnown RBP18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GJA9P57773 515 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ARHGAP8P85298 464 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GPR162Q16538 588 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ARL13BQ3SXY8 428 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 HSP90AA5PQ58FG0 334 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SPANXN3Q5MJ09 141 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RNF220Q5VTB9 566 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 AGMOQ6ZNB7 445 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 STRA8Q7Z7C7 330 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 MYLK4Q86YV6 388 aaPredicted RBP18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TNS4Q8IZW8 715 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TMEM86AQ8N2M4 240 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 DCLK2Q8N568 766 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PIWIL2Q8TC59 973 aaKnown RBP18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 UBE2OQ9C0C9 1292 aaKnown RBP18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CAB39LQ9H9S4 337 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SNX15Q9NRS6 342 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 BFARQ9NZS9 450 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GOLGA8TH3BQL2 631 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 LRIG2O94898 1065 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ARRB2P32121 409 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PGM1P36871 562 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GNASQ5JWF2 1037 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 FAM91A1Q658Y4 838 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PLD6Q8N2A8 252 aaKnown RBP18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RBM15BQ8NDT2 890 aaKnown RBP18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 MYLPFQ96A32 169 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 DCLRE1BQ9H816 532 aa18.74■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ZCWPW2A0A1B0GU75 182 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CHRNA1P02708 482 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PROCP04070 461 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 BDNFP23560 247 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 AIF1P55008 147 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 DLG2Q15700 870 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 STXBP5Q5T5C0 1151 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GDF6Q6KF10 455 aaPredicted RBP18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TMEM154Q6P9G4 183 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 WDR75Q8IWA0 830 aaKnown RBP18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SMARCD1Q96GM5 515 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CPNE1Q99829 537 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RTP3Q9BQQ7 232 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CCDC106Q9BWC9 280 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CHRAC1Q9NRG0 131 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CDH9Q9ULB4 789 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RPL26L1Q9UNX3 145 aaKnown RBP18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 KRT36O76013 467 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 POMCP01189 267 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GARSP41250 739 aaKnown RBP18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ERFP50548 548 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 NAB1Q13506 487 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 KCTD11Q693B1 232 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 FSTL4Q6MZW2 842 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RNF34Q969K3 372 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 AGO3Q9H9G7 860 aaKnown RBP18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PNPOQ9NVS9 261 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 COPG2Q9UBF2 871 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TRPV2Q9Y5S1 764 aa18.73■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 JCHAINP01591 159 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SRGAP2BP0DMP2 458 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 BRCC3P46736 316 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 IRF5Q13568 498 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RCN1Q15293 331 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ANKRD20A4Q4UJ75 823 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GRTP1Q5TC63 336 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TMEM135Q86UB9 458 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TAC4Q86UU9 113 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 USP33Q8TEY7 942 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PGAP3Q96FM1 320 aaPredicted RBP18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CLPTM1LQ96KA5 538 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GBA3Q9H227 469 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CASS4Q9NQ75 786 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms