RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 DTLQ9NZJ0 730 aa9.51□□□□□ -0.89
UCA1-201ENST00000397381 HESX1Q9UBX0 185 aa9.51□□□□□ -0.89
UCA1-201ENST00000397381 ANKRD6Q9Y2G4 727 aa9.51□□□□□ -0.89
UCA1-201ENST00000397381 NR2E3Q9Y5X4 410 aa9.51□□□□□ -0.89
UCA1-201ENST00000397381 PTPRFP10586 1907 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 MGAMO43451 1857 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 FER1L6Q2WGJ9 1857 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 RNF103O00237 685 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 TIMM44O43615 452 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 ATP6V1G1O75348 118 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 VAPBO95292 243 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 NFICP08651 508 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 CXCL8P10145 99 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 EPHA3P29320 983 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 MLH1P40692 756 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 STAT5BP51692 787 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 NDST1P52848 882 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 CSE1LP55060 971 aaKnown RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 OSTNP61366 133 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 PDAP1Q13442 181 aaKnown RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 IKBKEQ14164 716 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 PDK1Q15118 436 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 GOLGA7BQ2TAP0 167 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 LIPMQ5VYY2 423 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 MAP1SQ66K74 1059 aaPredicted RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 NCBP2-AS2Q69YL0 99 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 PAOXQ6QHF9 649 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 DPH6Q7L8W6 267 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 PATL1Q86TB9 770 aaKnown RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 RNF168Q8IYW5 571 aaPredicted RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 RNF149Q8NC42 400 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 RIN3Q8TB24 985 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 RSPH1Q8WYR4 309 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 KHSRPQ92945 711 aaKnown RBP eCLIP9.5□□□□□ -0.89
UCA1-201ENST00000397381 PGBD4Q96DM1 585 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 DUS3LQ96G46 650 aaKnown RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 RMND5BQ96G75 393 aaPredicted RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 AGAP3Q96P47 875 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 KCTD15Q96SI1 283 aaPredicted RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 FZD8Q9H461 694 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 LRRC40Q9H9A6 602 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 TUBA8Q9NY65 449 aaPredicted RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 RRN3Q9NYV6 651 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 IGSF9Q9P2J2 1179 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 RCOR3Q9P2K3 495 aaPredicted RBP9.5□□□□□ -0.89
UCA1-201ENST00000397381 AP4E1Q9UPM8 1137 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 SLC8A2Q9UPR5 921 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 AP4S1Q9Y587 144 aa9.5□□□□□ -0.89
UCA1-201ENST00000397381 C7orf72A4D263 438 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 SPDYE16A6NNV3 312 aaPredicted RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 FAM155AB1AL88 458 aaPredicted RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 NEMP1O14524 444 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 CBFA2T3O75081 653 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 RAD17O75943 681 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 CABYRO75952 493 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 HSPA1AP0DMV8 641 aaKnown RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 HSPA1BP0DMV9 641 aaKnown RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 YBX3P16989 372 aaKnown RBP eCLIP9.49□□□□□ -0.893e-10■■□□□ 12.1
UCA1-201ENST00000397381 DNAJB1P25685 340 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 DPP6P42658 865 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 CD97P48960 835 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 RGS7P49802 495 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 ESRRGP62508 458 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 TRAP1Q12931 704 aaKnown RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 PTK2BQ14289 1009 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 TMEM132AQ24JP5 1023 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 IRAK1BP1Q5VVH5 260 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 IL23RQ5VWK5 629 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 KRT80Q6KB66 452 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 FSTL4Q6MZW2 842 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 TMEM110Q86TL2 294 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 TTC30AQ86WT1 665 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
UCA1-201ENST00000397381 CXorf38Q8TB03 319 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 URGCPQ8TCY9 931 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 CENPIQ92674 756 aaPredicted RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 HPDLQ96IR7 371 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 TSNARE1Q96NA8 513 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 NT5C1AQ9BXI3 368 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 CDT1Q9H211 546 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 COQ10BQ9H8M1 238 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 CLK4Q9HAZ1 481 aaKnown RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 IPO11Q9UI26 975 aaKnown RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 BLOC1S6Q9UL45 172 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 ZNF214Q9UL59 606 aaPredicted RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 ADAMTS5Q9UNA0 930 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 TNFSF13BQ9Y275 285 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 PCDHGA4Q9Y5G9 962 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 PHIPQ8WWQ0 1821 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 TCAF2A6NFQ2 919 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 LACTBL1A8MY62 500 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 PIGNO95427 931 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 STAU1O95793 577 aaKnown RBP9.49□□□□□ -0.89
UCA1-201ENST00000397381 C2P06681 752 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 CD1EP15812 388 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 TFEBP19484 476 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 YY1P25490 414 aa9.49□□□□□ -0.89
UCA1-201ENST00000397381 MSX2P35548 267 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms