RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CNTFP26441 200 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 PCSK1P29120 753 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 EBF4Q9BQW3 602 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 PRDM16Q9HAZ2 1276 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 TAS2R1Q9NYW7 299 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 NUDT5Q9UKK9 219 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 NUP205Q92621 2012 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 HTTP42858 3142 aa24.29■■□□□ 1.48
PABPN1-202ENST00000397276 MANSC4A6NHS7 340 aaPredicted RBP24.28■■□□□ 1.48
PABPN1-202ENST00000397276 GSRP00390 522 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 POLE2P56282 527 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 PPIDQ08752 370 aaKnown RBP24.28■■□□□ 1.48
PABPN1-202ENST00000397276 CMPK2Q5EBM0 449 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 LRRTM3Q86VH5 581 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 SOCS4Q8WXH5 440 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 GIT1Q9Y2X7 761 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 PTCH2Q9Y6C5 1203 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 C9IYK1 514 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 DNAJC6O75061 913 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 AP2A1O95782 977 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 ITGB1P05556 798 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 GJA9P57773 515 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 SCAPQ12770 1279 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 CRHR2Q13324 411 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 RBBP5Q15291 538 aaKnown RBP24.28■■□□□ 1.48
PABPN1-202ENST00000397276 HSP90AA5PQ58FG0 334 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 CCNJLQ8IV13 435 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 ATP2A3Q93084 1043 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 EPAS1Q99814 870 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 KCNK4Q9NYG8 393 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 BFARQ9NZS9 450 aa24.28■■□□□ 1.48
PABPN1-202ENST00000397276 ENO1P06733 434 aaKnown RBP24.27■■□□□ 1.48
PABPN1-202ENST00000397276 FAM163BP0C2L3 166 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 ALDH18A1P54886 795 aaKnown RBP24.27■■□□□ 1.48
PABPN1-202ENST00000397276 SPDYAQ5MJ70 313 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 LRRC74BQ6ZQY2 392 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 FBXO27Q8NI29 283 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 MLPHQ9BV36 600 aaPredicted RBP24.27■■□□□ 1.48
PABPN1-202ENST00000397276 CHRAC1Q9NRG0 131 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 TMEM216Q9P0N5 145 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 ZNF236Q9UL36 1845 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 A0A1B0GVG6 124 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 GPR182O15218 404 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 PSMG1O95456 288 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 ODC1P11926 461 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 GARSP41250 739 aaKnown RBP24.27■■□□□ 1.48
PABPN1-202ENST00000397276 IRGCQ6NXR0 463 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 ARHGAP36Q6ZRI8 547 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 STRA8Q7Z7C7 330 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 EGFL6Q8IUX8 553 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 MCUR1Q96AQ8 359 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 NAT9Q9BTE0 207 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 CAB39LQ9H9S4 337 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 CHST12Q9NRB3 414 aa24.27■■□□□ 1.48
PABPN1-202ENST00000397276 ARHGAP42A6NI28 874 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 IL1BP01584 269 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 KYAT3Q6YP21 454 aaKnown RBP24.26■■□□□ 1.47
PABPN1-202ENST00000397276 OTOP3Q7RTS5 596 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 TREML1Q86YW5 311 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 C10orf107Q8IVU9 208 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 OR10T2Q8NGX3 314 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 TRIB2Q92519 343 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 LRRC40Q9H9A6 602 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 GABRQQ9UN88 632 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 HBS1LQ9Y450 684 aaKnown RBP24.26■■□□□ 1.47
PABPN1-202ENST00000397276 DFFAO00273 331 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 GLRA3O75311 464 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 SNNO75324 88 aaPredicted RBP24.26■■□□□ 1.47
PABPN1-202ENST00000397276 AIF1P55008 147 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 SERINC5Q86VE9 423 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 TNS4Q8IZW8 715 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 LRCH1Q9Y2L9 728 aa24.26■■□□□ 1.47
PABPN1-202ENST00000397276 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.26■■□□□ 1.47
PABPN1-202ENST00000397276 BIRC5O15392 142 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 PLIN3O60664 434 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 F9P00740 461 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 GP5P40197 560 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 CXCR3P49682 368 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 PGFP49763 221 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 THOC5Q13769 683 aaKnown RBP24.25■■□□□ 1.47
PABPN1-202ENST00000397276 METTL23Q86XA0 190 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 DCLK2Q8N568 766 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.25■■□□□ 1.479e-7■■■□□ 15
PABPN1-202ENST00000397276 DQX1Q8TE96 717 aaKnown RBP24.25■■□□□ 1.47
PABPN1-202ENST00000397276 ADAM2Q99965 735 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 THAP1Q9NVV9 213 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 ETAA1Q9NY74 926 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.25■■□□□ 1.47
PABPN1-202ENST00000397276 LMNAP02545 664 aaKnown RBP24.25■■□□□ 1.47
PABPN1-202ENST00000397276 RPL9P32969 192 aaKnown RBP24.25■■□□□ 1.47
PABPN1-202ENST00000397276 PGGT1BP53609 377 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 KDSRQ06136 332 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 SLC34A1Q06495 639 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 DLG2Q15700 870 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 SPANXN3Q5MJ09 141 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 SH3TC2Q8TF17 1288 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 PGAP3Q96FM1 320 aaPredicted RBP24.25■■□□□ 1.47
PABPN1-202ENST00000397276 IFT43Q96FT9 208 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 ZFYVE28Q9HCC9 887 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 SFMBT1Q9UHJ3 866 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms