RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PPP3R2Q96LZ3 170 aa15.91■□□□□ 0.14
GNE-202ENST00000396594 TKTL2Q9H0I9 626 aa15.91■□□□□ 0.14
GNE-202ENST00000396594 CAMTA1Q9Y6Y1 1673 aa15.91■□□□□ 0.14
GNE-202ENST00000396594 RECQL5O94762 991 aaPredicted RBP15.9■□□□□ 0.14
GNE-202ENST00000396594 COL6A2P12110 1019 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 TCF3P15923 654 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 SLC1A6P48664 564 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 AMHR2Q16671 573 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 SETMARQ53H47 684 aaPredicted RBP15.9■□□□□ 0.14
GNE-202ENST00000396594 LRRC55Q6ZSA7 311 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 KRT73Q86Y46 540 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 PIK3R5Q8WYR1 880 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 DPF3Q92784 378 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 ASTN1O14525 1302 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 SMIM22K7EJ46 135 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 EML1O00423 815 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 FASP25445 335 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 PLCL1Q15111 1095 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 TSHZ1Q6ZSZ6 1077 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 STK32AQ8WU08 396 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 APOL4Q9BPW4 351 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 DUSP16Q9BY84 665 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 OPTCQ9UBM4 332 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 NTSP30990 170 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 MATKP42679 507 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 ALG11Q2TAA5 492 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 PARP15Q460N3 678 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 AENQ8WTP8 325 aaKnown RBP15.9■□□□□ 0.14
GNE-202ENST00000396594 KCTD14Q9BQ13 255 aaPredicted RBP15.9■□□□□ 0.14
GNE-202ENST00000396594 TMEM120AQ9BXJ8 343 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 FNIP2Q9P278 1114 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 PCDHA2Q9Y5H9 948 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 GRIN2DO15399 1336 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 GNG14A0A1W2PPG7 69 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 TTKP33981 857 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 ELK3P41970 407 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 PLOD1Q02809 727 aaPredicted RBP15.9■□□□□ 0.14
GNE-202ENST00000396594 MAMLD1Q13495 774 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 RASA2Q15283 850 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 FNDC3BQ53EP0 1204 aaKnown RBP15.9■□□□□ 0.14
GNE-202ENST00000396594 KLHL35Q6PF15 583 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 ALLCQ8N6M5 410 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 NAALADL1Q9UQQ1 740 aa15.9■□□□□ 0.14
GNE-202ENST00000396594 TYMPP19971 482 aa15.89■□□□□ 0.14
GNE-202ENST00000396594 ITGA1P56199 1179 aa15.89■□□□□ 0.14
GNE-202ENST00000396594 CSHL1Q14406 222 aa15.89■□□□□ 0.14
GNE-202ENST00000396594 NR6A1Q15406 480 aa15.89■□□□□ 0.14
GNE-202ENST00000396594 HLA-DQA1Q5Y7H0 255 aa15.89■□□□□ 0.14
GNE-202ENST00000396594 WDR59Q6PJI9 974 aa15.89■□□□□ 0.14
GNE-202ENST00000396594 KCNT2Q6UVM3 1135 aa15.89■□□□□ 0.14
GNE-202ENST00000396594 HAS1Q92839 578 aa15.89■□□□□ 0.14
GNE-202ENST00000396594 SYNDIG1Q9H7V2 258 aa15.89■□□□□ 0.14
GNE-202ENST00000396594 MARCOQ9UEW3 520 aaPredicted RBP15.89■□□□□ 0.14
GNE-202ENST00000396594 YBEYP58557 167 aaPredicted RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 CAPSQ13938 189 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 KCNT1Q5JUK3 1230 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 MAP1SQ66K74 1059 aaPredicted RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 R3HCC1LQ7Z5L2 792 aaKnown RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 EID3Q8N140 333 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 EPS8L3Q8TE67 593 aaKnown RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 RNF157Q96PX1 679 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 MLPHQ9BV36 600 aaPredicted RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 PACSIN1Q9BY11 444 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 NINJ2Q9NZG7 142 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 ENTPD4Q9Y227 616 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 KLHL20Q9Y2M5 609 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 ARIH1Q9Y4X5 557 aaPredicted RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 PQBP1O60828 265 aaKnown RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 DUSP11O75319 330 aaKnown RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 COL6A1P12109 1028 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 IMPDH2P12268 514 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 PSMC3P17980 439 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 OGNP20774 298 aaKnown RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 STXBP5Q5T5C0 1151 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 DEPDC1Q5TB30 811 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 MILR1Q7Z6M3 343 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 NSMCE2Q96MF7 247 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 POP1Q99575 1024 aaKnown RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 KLHL4Q9C0H6 718 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 OSGEPQ9NPF4 335 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 A0A096LPK6 155 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 TRAFD1O14545 582 aaPredicted RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 PCDH8O95206 1070 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 PCYT1AP49585 367 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 CLK3P49761 638 aaKnown RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 GYS2P54840 703 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 ACTN3Q08043 901 aaPredicted RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 LEMD2Q8NC56 503 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 RNF208Q9H0X6 261 aa15.89■□□□□ 0.13
GNE-202ENST00000396594 KIAA1522Q9P206 1035 aaPredicted RBP15.89■□□□□ 0.13
GNE-202ENST00000396594 CLDN11O75508 207 aa15.88■□□□□ 0.13
GNE-202ENST00000396594 CCDC130P13994 396 aa15.88■□□□□ 0.13
GNE-202ENST00000396594 GPR15P49685 360 aa15.88■□□□□ 0.13
GNE-202ENST00000396594 AQP5P55064 265 aa15.88■□□□□ 0.13
GNE-202ENST00000396594 ZNF280AP59817 542 aaPredicted RBP15.88■□□□□ 0.13
GNE-202ENST00000396594 PPIGQ13427 754 aaKnown RBP eCLIP15.88■□□□□ 0.13
GNE-202ENST00000396594 MFSD7Q6UXD7 560 aa15.88■□□□□ 0.13
GNE-202ENST00000396594 ATG4AQ8WYN0 398 aa15.88■□□□□ 0.13
GNE-202ENST00000396594 C9orf16Q9BUW7 83 aa15.88■□□□□ 0.13
GNE-202ENST00000396594 GPATCH2LQ9NWQ4 482 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms