RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 MTG1Q9BT17 334 aaPredicted RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 SLC9A8Q9Y2E8 581 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 CLTCL1P53675 1640 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 RNF17Q9BXT8 1623 aaKnown RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 CKBP12277 381 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 PKNOX1P55347 436 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 NFIAQ12857 509 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 DEPDC4Q8N2C3 294 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 GPRC5AQ8NFJ5 357 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 MAGEC3Q8TD91 643 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 SPAG4Q9NPE6 437 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 OPTCQ9UBM4 332 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 BTN3A1O00481 513 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 THP07101 528 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 SSTR1P30872 391 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 GRIA3P42263 894 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 RBBP4Q09028 425 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 TRAP1Q12931 704 aaKnown RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 PDK3Q15120 406 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 TAF1CQ15572 869 aaPredicted RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 NEK5Q6P3R8 708 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 SAPCD2Q86UD0 394 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 CPB2Q96IY4 423 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 ITGA11Q9UKX5 1188 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 MYL9P24844 172 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 BNC1Q01954 994 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 RABL6Q3YEC7 729 aaPredicted RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 TUBA8Q9NY65 449 aaPredicted RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 HACD1B0YJ81 288 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 SPTLC1O15269 473 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 ENTPD3O75355 529 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 RPA3P35244 121 aaPredicted RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 GRB10Q13322 594 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 BOP1Q14137 746 aaKnown RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 ZNF846Q147U1 533 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 ZNF484Q5JVG2 852 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 PERM1Q5SV97 790 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 MTFMTQ96DP5 389 aaKnown RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 PANX3Q96QZ0 392 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 DMGDHQ9UI17 866 aaKnown RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 FAM92AA1XBS5 289 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 PTDSS1P48651 473 aaKnown RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 HIRAP54198 1017 aaPredicted RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 SLC15A2Q16348 729 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 SYT12Q8IV01 421 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 KIAA1683Q9H0B3 1180 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 SENP2Q9HC62 589 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 NEK6Q9HC98 313 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 EURLQ9NYK6 297 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 C3orf18Q9UK00 162 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 IRAK3Q9Y616 596 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 ANKRD12Q6UB98 2062 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 GON4LQ3T8J9 2241 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 A0A088AWK7 358 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 COX7A2P14406 83 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 ZNF10P21506 573 aaPredicted RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 SMCO1Q147U7 214 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 AKAP14Q86UN6 197 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 FUKQ8N0W3 1084 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 TRPV3Q8NET8 790 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 PTCD3Q96EY7 689 aaKnown RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 CBWD1Q9BRT8 395 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 CATSPERZQ9NTU4 200 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 GMPPBQ9Y5P6 360 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 TYMPP19971 482 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 RASA1P20936 1047 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 OR1E1P30953 314 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 CCR4P51679 360 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 NR1H2P55055 460 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 USP46P62068 366 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 ZCCHC9Q8N567 271 aaKnown RBP14.19□□□□□ -0.14
COL4A3-202ENST00000396578 GGA3Q9NZ52 723 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 COMMD3-BMI1R4GMX3 469 aa14.19□□□□□ -0.14
COL4A3-202ENST00000396578 SLC12A8A0AV02 714 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 PCDH8O95206 1070 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 CRATP43155 626 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 NUMBP49757 651 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 RPL14P50914 215 aaKnown RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 EPHB3P54753 998 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 HSF2Q03933 536 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 CDC42EP5Q6NZY7 148 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ZNF549Q6P9A3 640 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 HHIPL2Q6UWX4 724 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 CXXC5Q7LFL8 322 aaKnown RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 RNF180Q86T96 592 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 CCDC36Q8IYA8 594 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 REXO5Q96IC2 774 aaKnown RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 FBXO44Q9H4M3 255 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 COG5Q9UP83 839 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ICAM1P05362 532 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 IFI35P80217 286 aaPredicted RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 RNF44Q7L0R7 432 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ARMCX6Q7L4S7 300 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 HIPK1Q86Z02 1210 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ZNF540Q8NDQ6 660 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 FBXO30Q8TB52 745 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 TRIT1Q9H3H1 467 aaKnown RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ZFYVE28Q9HCC9 887 aa14.18□□□□□ -0.14
COL4A3-202ENST00000396578 TRMT13Q9NUP7 481 aaKnown RBP14.18□□□□□ -0.14
COL4A3-202ENST00000396578 ZNRF3Q9ULT6 936 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms