RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CFAP52Q8N1V2 620 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 LEMD2Q8NC56 503 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 TEKT5Q96M29 485 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 RBM15Q96T37 977 aaKnown RBP eCLIP13.02□□□□□ -0.335e-6■■□□□ 11.5
TRIM39-204ENST00000396548 VAT1Q99536 393 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 CEP41Q9BYV8 373 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 EIF2B3Q9NR50 452 aaKnown RBP13.02□□□□□ -0.33
TRIM39-204ENST00000396548 SMPD4Q9NXE4 827 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 TRHDEQ9UKU6 1024 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 ARHGAP26Q9UNA1 814 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 TRAV19A0A0A6YYK7 116 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 RASA4BC9J798 803 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 H3BQF6 201 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 DFFAO00273 331 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 RASA4O43374 803 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 FDFT1P37268 417 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 BASP1P80723 227 aaKnown RBP13.02□□□□□ -0.33
TRIM39-204ENST00000396548 TAB3Q8N5C8 712 aaPredicted RBP13.02□□□□□ -0.33
TRIM39-204ENST00000396548 ARNTL2Q8WYA1 636 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 PDFQ9HBH1 243 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 NINJ2Q9NZG7 142 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 PLAAQ9Y263 795 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 TBC1D30Q9Y2I9 924 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 KIF26AQ9ULI4 1882 aaPredicted RBP13.01□□□□□ -0.33
TRIM39-204ENST00000396548 CCDC195A0A1B0GUA6 201 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
TRIM39-204ENST00000396548 SERINC3Q13530 473 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 FASTKD3Q14CZ7 662 aaKnown RBP13.01□□□□□ -0.33
TRIM39-204ENST00000396548 TEAD2Q15562 447 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 PARP15Q460N3 678 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 FAXCQ5TGI0 409 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 RBM23Q86U06 439 aaKnown RBP13.01□□□□□ -0.33
TRIM39-204ENST00000396548 ATPAF2Q8N5M1 289 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 TEX26Q8N6G2 289 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 ARHGEF2Q92974 986 aaKnown RBP13.01□□□□□ -0.33
TRIM39-204ENST00000396548 GBA3Q9H227 469 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 DONSONQ9NYP3 566 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 BPTFQ12830 3046 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 SZT2Q5T011 3432 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 GOLGA6BA6NDN3 693 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRIM39-204ENST00000396548 TTC4O95801 387 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 TCF3P15923 654 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 IFNAR2P48551 515 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 RPS24P62847 133 aaKnown RBP13.01□□□□□ -0.33
TRIM39-204ENST00000396548 NTHL1P78549 312 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 RABGAP1LQ5R372 815 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 CXorf57Q6NSI4 855 aaKnown RBP13.01□□□□□ -0.33
TRIM39-204ENST00000396548 CMTM8Q8IZV2 173 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 EXOC4Q96A65 974 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 DPP7Q9UHL4 492 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 CCL26Q9Y258 94 aa13.01□□□□□ -0.33
TRIM39-204ENST00000396548 LEFTY2O00292 366 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 SUN1O94901 812 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 SHBGP04278 402 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 CCNB1P14635 433 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 PSMB4P28070 264 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 MAGEA4P43358 317 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 YBEYP58557 167 aaPredicted RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 TTC39BQ5VTQ0 682 aaPredicted RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 TMEM184AQ6ZMB5 413 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 ARHGEF18Q6ZSZ5 1173 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 CPXM2Q8N436 756 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 UBLCP1Q8WVY7 318 aaPredicted RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 SERPINB12Q96P63 405 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 DNAJC17Q9NVM6 304 aaKnown RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 GOLGA8MH3BSY2 632 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 J3KR12 359 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 TRDMT1O14717 391 aaKnown RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 XYLBO75191 536 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 CLDN11O75508 207 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 BANF1O75531 89 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 STK10O94804 968 aaKnown RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 WEE1P30291 646 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 ACTN2P35609 894 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 NRIP1P48552 1158 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 ZNF844Q08AG5 666 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 SLC29A2Q14542 456 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 CFAP58Q5T655 872 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 TIGD7Q6NT04 549 aaPredicted RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 GRASPQ7Z6J2 395 aaPredicted RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 TDHQ8IZJ6 230 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 MLPHQ9BV36 600 aaPredicted RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 TASP1Q9H6P5 420 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 TLE6Q9H808 572 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 PLAC1Q9HBJ0 212 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 SEPT10Q9P0V9 454 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 IPO11Q9UI26 975 aaKnown RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 TEX264Q9Y6I9 313 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 OR1E1P30953 314 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 ACVRL1P37023 503 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 HIF1AQ16665 826 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 GPR158Q5T848 1215 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 CEP128Q6ZU80 1094 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 CCDC25Q86WR0 208 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 IGDCC3Q8IVU1 814 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 OR2W6PQ8NHA6 318 aa13□□□□□ -0.33
TRIM39-204ENST00000396548 USP13Q92995 863 aaPredicted RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 MRPL38Q96DV4 380 aaKnown RBP13□□□□□ -0.33
TRIM39-204ENST00000396548 ZSWIM3Q96MP5 696 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms