RNA–Protein interactions for RNA: ENST00000395983.7

BDNF-206, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-206ENST00000395983 TRIM38O00635 465 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 MAP3K13O43283 966 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 TXNP10599 105 aaKnown RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 NUMBP49757 651 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 SLC12A2P55011 1212 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 IGBP1P78318 339 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 SLC10A2Q12908 348 aaPredicted RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 SNAPC2Q13487 334 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 PAFAH1B3Q15102 231 aaKnown RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 PCBP1Q15365 356 aaKnown RBP eCLIP8.43□□□□□ -1.06
BDNF-206ENST00000395983 KCNMB4Q86W47 210 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 TMEM192Q8IY95 271 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 TRIML2Q8N7C3 387 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 C12orf29Q8N999 325 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 IRGQQ8WZA9 623 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 PBXIP1Q96AQ6 731 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 EME1Q96AY2 570 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 NMD3Q96D46 503 aaKnown RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 SLC9A7Q96T83 725 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 MMP19Q99542 508 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 FDXACB1Q9BRP7 624 aaPredicted RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 LRRC4Q9HBW1 653 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 EML4Q9HC35 981 aaKnown RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 C20orf96Q9NUD7 363 aaPredicted RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 UBQLN1Q9UMX0 589 aaKnown RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 GMEB1Q9Y692 573 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 ZBTB42B2RXF5 422 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 ZNF195O14628 629 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 CFLARO15519 480 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 C22orf31O95567 290 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 ASLP04424 464 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 C2P06681 752 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 ENO3P13929 434 aaPredicted RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 ARF4P18085 180 aaPredicted RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 PAMP19021 973 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 CYP3A5P20815 502 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 MLH1P40692 756 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 GRIA1P42261 906 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 GMPSP49915 693 aaPredicted RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 ESRRGP62508 458 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 USP4Q13107 963 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 HSDL1Q3SXM5 330 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 KRT80Q6KB66 452 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 FSTL4Q6MZW2 842 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 SATL1Q86VE3 508 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 SIX6OS1Q8N1H7 587 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 PHTF2Q8N3S3 785 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 CEP70Q8NHQ1 597 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 ARNTL2Q8WYA1 636 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 PIWIL1Q96J94 861 aaKnown RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 PRICKLE1Q96MT3 831 aaPredicted RBP8.43□□□□□ -1.06
BDNF-206ENST00000395983 LGMNQ99538 433 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 TRIM15Q9C019 465 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 RRN3Q9NYV6 651 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 CLIC5Q9NZA1 410 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 NCKIPSDQ9NZQ3 722 aa8.43□□□□□ -1.06
BDNF-206ENST00000395983 MFSD11O43934 449 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 PFDN1O60925 122 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 CRADDP78560 199 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 MRPS22P82650 360 aaKnown RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 PTK2BQ14289 1009 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 DALRD3Q5D0E6 543 aaKnown RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 ARMC3Q5W041 872 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 RBM44Q6ZP01 1051 aaKnown RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 TMEM135Q86UB9 458 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 ZNF668Q96K58 619 aaPredicted RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 CNBD2Q96M20 576 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 OSBPL11Q9BXB4 747 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 SETD4Q9NVD3 440 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 SCAF8Q9UPN6 1271 aaKnown RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 GJA3Q9Y6H8 435 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 LOC285556D6RIA3 1793 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 BCAS2O75934 225 aaPredicted RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 FBXO21O94952 628 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 TOP3BO95985 862 aaKnown RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 ADORA2BP29275 332 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 GNL1P36915 607 aaPredicted RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 RANBP1P43487 201 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 CDH17Q12864 832 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 USP10Q14694 798 aaKnown RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 SLC9B1Q4ZJI4 515 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 PPM1JQ5JR12 505 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 VWA5B1Q5TIE3 1220 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 SAMD7Q7Z3H4 446 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 PIWIL4Q7Z3Z4 852 aaKnown RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 MAVSQ7Z434 540 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 FAM131BQ86XD5 332 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 ZNF567Q8N184 647 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 VPS39Q96JC1 886 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 C11orf84Q9BUA3 381 aaPredicted RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 GATA5Q9BWX5 397 aaPredicted RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 RHOJQ9H4E5 214 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 PRDM12Q9H4Q4 367 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 MINDY3Q9H8M7 445 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 PHF24Q9UPV7 400 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 XPO1O14980 1071 aaKnown RBP8.42□□□□□ -1.06
BDNF-206ENST00000395983 NPHS1O60500 1241 aa8.42□□□□□ -1.06
BDNF-206ENST00000395983 DNAJA2O60884 412 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms