RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 ZNF597Q96LX8 424 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 OSBPL11Q9BXB4 747 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 ZBTB26Q9HCK0 441 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 ZNF358Q9NW07 568 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 RSL24D1Q9UHA3 163 aaKnown RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 CABYRO75952 493 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 C8BP07358 591 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 HSPA1AP0DMV8 641 aaKnown RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 HSPA1BP0DMV9 641 aaKnown RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 ERVK-10P10266 1014 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 CSRP3P50461 194 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 ADARP55265 1226 aaKnown RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 CDKL1Q00532 357 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 LIPMQ5VYY2 423 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 DPH6Q7L8W6 267 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 TMEM135Q86UB9 458 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 TTC30AQ86WT1 665 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.87□□□□□ -0.99
BDNF-204ENST00000395980 URGCPQ8TCY9 931 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 TBCCD1Q9NVR7 557 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 SUCOQ9UBS9 1254 aaKnown RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 ZNF112Q9UJU3 913 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 CDYLQ9Y232 598 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 ZSWIM8A7E2V4 1837 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 ZSCAN9O15535 394 aaPredicted RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 ZNF26P17031 533 aaPredicted RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 ART3Q13508 389 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 C6orf52Q5T4I8 152 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 OLFML2BQ68BL8 750 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 ARHGAP17Q68EM7 881 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 FSTL4Q6MZW2 842 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 IYDQ6PHW0 289 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 STRA8Q7Z7C7 330 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 NIM1KQ8IY84 436 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 TNS4Q8IZW8 715 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 RIN3Q8TB24 985 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 JDP2Q8WYK2 163 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 PGBD4Q96DM1 585 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 DUS3LQ96G46 650 aaKnown RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 DDX18Q9NVP1 670 aaKnown RBP8.87□□□□□ -0.99
BDNF-204ENST00000395980 HOXC10Q9NYD6 342 aa8.87□□□□□ -0.99
BDNF-204ENST00000395980 BRWD3Q6RI45 1802 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 C2P06681 752 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 YBX3P16989 372 aaKnown RBP eCLIP8.86□□□□□ -0.99
BDNF-204ENST00000395980 MPSTP25325 297 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PSMB4P28070 264 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 MLH1P40692 756 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 MS4A2Q01362 244 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 MEX3CQ5U5Q3 659 aaKnown RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 IFNLR1Q8IU57 520 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 TSPAN14Q8NG11 270 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 HM13Q8TCT9 377 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 ASB9Q96DX5 294 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 P2RY11Q96G91 374 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 MCMBPQ9BTE3 642 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 NSMCE4AQ9NXX6 385 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PCDHGB4Q9UN71 923 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PCDHGB5Q9Y5G0 923 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 ERI2A8K979 691 aaKnown RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 GRID2O43424 1007 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PTPRAP18433 802 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 RPL34P49207 117 aaKnown RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 SLC26A2P50443 739 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PPIDQ08752 370 aaKnown RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 IFRD2Q12894 506 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 LPIN1Q14693 890 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PPP2R5DQ14738 602 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PPM1LQ5SGD2 360 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PPP1R26Q5T8A7 1209 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 CARM1Q86X55 608 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 AGAP3Q96P47 875 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 ACE2Q9BYF1 805 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 PICK1Q9NRD5 415 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 BFARQ9NZS9 450 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 ZNHIT2Q9UHR6 403 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 A0A0G2JMZ2 1700 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 LRRC37A2A6NM11 1700 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 SPDYE16A6NNV3 312 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 MFSD11O43934 449 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 H6PDO95479 791 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 PHKA2P46019 1235 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 HMGCS2P54868 508 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 FSTL1Q12841 308 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 SLC10A6Q3KNW5 377 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 MGAT5BQ3V5L5 792 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 ZNF669Q96BR6 464 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 FCRL3Q96P31 734 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 UHRF1Q96T88 793 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 LGMNQ99538 433 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 DNAI2Q9GZS0 605 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 WDR55Q9H6Y2 383 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 ZNF277Q9NRM2 450 aaPredicted RBP8.86□□□□□ -0.99
BDNF-204ENST00000395980 PNPLA3Q9NST1 481 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 ZNF510Q9Y2H8 683 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 RAD54BQ9Y620 910 aa8.86□□□□□ -0.99
BDNF-204ENST00000395980 MAGEB16A2A368 324 aa8.85□□□□□ -0.99
BDNF-204ENST00000395980 ZNF701M0R085 212 aaPredicted RBP8.85□□□□□ -0.99
BDNF-204ENST00000395980 GABBR2O75899 941 aa8.85□□□□□ -0.99
BDNF-204ENST00000395980 VAPBO95292 243 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms