RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CNTN1Q12860 1018 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 NCAPHQ15003 741 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 ZNF542PQ5EBM4 170 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 PITRM1Q5JRX3 1037 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 PPP1R26Q5T8A7 1209 aaPredicted RBP14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 MMS22LQ6ZRQ5 1243 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 RSRC2Q7L4I2 434 aaKnown RBP14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 B3GNT8Q7Z7M8 397 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 VASH2Q86V25 355 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 MFN1Q8IWA4 741 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 C12orf56Q8IXR9 622 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 PARD3BQ8TEW8 1205 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 FRS2Q8WU20 508 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 SLC12A9Q9BXP2 914 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 PREBQ9HCU5 417 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 KLF15Q9UIH9 416 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 MED13Q9UHV7 2174 aa14.14□□□□□ -0.15
VCPKMT-201ENST00000395859 GOLGA6L7A0A1B0GV03 622 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 CLIC2O15247 247 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 IRAK2O43187 625 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 PHACTR2O75167 634 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 BMP15O95972 392 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 CSF2P04141 144 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 PRLRP16471 622 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 CYP2J2P51589 502 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 AP3M2P53677 418 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 HNRNPKP61978 463 aaKnown RBP eCLIP14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 SNRPFP62306 86 aaKnown RBP14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 ECT2LQ008S8 904 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 KCNAB2Q13303 367 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 BIRC3Q13489 604 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 FZD2Q14332 565 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 SGSM1Q2NKQ1 1148 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 ZNF284Q2VY69 593 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 MANEAQ5SRI9 462 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 NADSYN1Q6IA69 706 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 SPOPLQ6IQ16 392 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 PIGZQ86VD9 579 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 TICAM1Q8IUC6 712 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 FBXO39Q8N4B4 442 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 NDRG1Q92597 394 aaKnown RBP14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 ZSCAN31Q96LW9 406 aaPredicted RBP14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 SPAG5Q96R06 1193 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 NT5C1AQ9BXI3 368 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 OLA1Q9NTK5 396 aaKnown RBP14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 SFMBT1Q9UHJ3 866 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 PPM1HQ9ULR3 514 aa14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 PRRC2CQ9Y520 2896 aaKnown RBP14.13□□□□□ -0.15
VCPKMT-201ENST00000395859 PDZD2O15018 2839 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 A0A087X0B3 334 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 TPP1O14773 563 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 SLC31A1O15431 190 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 MSI1O43347 362 aaKnown RBP14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 P4HA1P13674 534 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 POLE2P56282 527 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 ZACNQ401N2 412 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 PIP5KL1Q5T9C9 394 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 RAB11FIP2Q7L804 512 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 SLC35F3Q8IY50 421 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 TAF4BQ92750 862 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 AZIN2Q96A70 460 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 RPL10LQ96L21 214 aaKnown RBP14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 BMFQ96LC9 184 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 MYOCQ99972 504 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 CALN1Q9BXU9 219 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 FZD3Q9NPG1 666 aa14.12□□□□□ -0.15
VCPKMT-201ENST00000395859 SPTY2D1-AS1A0A0U1RR47 76 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 ZBED1O96006 694 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 RPN1P04843 607 aaKnown RBP14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 HGFP14210 728 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 STK19P49842 368 aaPredicted RBP14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 VASPP50552 380 aaPredicted RBP14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 CLDN2P57739 230 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 RPS24P62847 133 aaKnown RBP14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 NR0B2Q15466 257 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 RRAGBQ5VZM2 374 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 NEK5Q6P3R8 708 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 BORAQ6PGQ7 559 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 STXBP4Q6ZWJ1 553 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 APCDD1Q8J025 514 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 HJURPQ8NCD3 748 aaPredicted RBP14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 SPATA20Q8TB22 786 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 CCDC3Q9BQI4 270 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 DNAJC28Q9NX36 388 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 CCDC39Q9UFE4 941 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 F8P00451 2351 aa14.11□□□□□ -0.15
VCPKMT-201ENST00000395859 APCP25054 2843 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 A0A1W2PQU0 124 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 AQP9O43315 295 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 ACSL4O60488 711 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 RNF224P0DH78 156 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 HNRNPA2B1P22626 353 aaKnown RBP14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 CCKBRP32239 447 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 SPIDRQ14159 915 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 MSANTD2Q6P1R3 559 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 Q6ZSR6 202 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 HORMAD1Q86X24 394 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 ZFAND4Q86XD8 727 aa14.1□□□□□ -0.15
VCPKMT-201ENST00000395859 DCP2Q8IU60 420 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms