RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MTA2O94776 668 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 EPHX1P07099 455 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 RARAP10276 462 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 GABRG2P18507 467 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 SSR1P43307 286 aaKnown RBP16.98■□□□□ 0.31
CXCL1-201ENST00000395761 STK19P49842 368 aaPredicted RBP16.98■□□□□ 0.31
CXCL1-201ENST00000395761 TAS2R40P59535 323 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 MESDQ14696 234 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 TCEAL1Q15170 157 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 BOLA3Q53S33 107 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 RFFLQ8WZ73 363 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 HSPH1Q92598 858 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 SLC6A17Q9H1V8 727 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 PCDHGA2Q9Y5H1 932 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 ADGRG1Q9Y653 693 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 RCCD1A6NED2 376 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 TTC34A8MYJ7 566 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 EEF2KO00418 725 aaKnown RBP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 SYNCRIPO60506 623 aaKnown RBP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 ALDH1A2O94788 518 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 IPO7O95373 1038 aaKnown RBP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 GOT1P17174 413 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 GLDCP23378 1020 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 NBL1P41271 181 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 MAPKAPK2P49137 400 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 TPI1P60174 286 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 ST8SIA6P61647 398 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 GNA12Q03113 381 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 SULT2A1Q06520 285 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 STARD3Q14849 445 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 E2F5Q15329 346 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 ATP13A4Q4VNC1 1196 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 PPP6R3Q5H9R7 873 aaPredicted RBP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 PSTKQ8IV42 348 aaKnown RBP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 RHOT2Q8IXI1 618 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 RTL3Q8N8U3 475 aaKnown RBP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 ACRBPQ8NEB7 543 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 SPON2Q9BUD6 331 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 TPSD1Q9BZJ3 242 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 RETREG1Q9H6L5 497 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 NOL6Q9H6R4 1146 aaKnown RBP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 LUC7LQ9NQ29 371 aaKnown RBP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 BCCIPQ9P287 314 aaKnown RBP eCLIP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 INVSQ9Y283 1065 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 MUC22E2RYF6 1773 aaPredicted RBP16.97■□□□□ 0.31
CXCL1-201ENST00000395761 DOCK4Q8N1I0 1966 aa16.97■□□□□ 0.31
CXCL1-201ENST00000395761 CCDC163A0A0D9SF12 145 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 MT-CO1P00395 513 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 SRPRAP08240 638 aaKnown RBP16.96■□□□□ 0.31
CXCL1-201ENST00000395761 NDUFV2P19404 249 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 ACVRL1P37023 503 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 DPYSL2Q16555 572 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 LINGO4Q6UY18 593 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 ZNF783Q6ZMS7 281 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 ZNF662Q6ZS27 426 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 RFX8Q6ZV50 586 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 PGBD3Q8N328 593 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 MKRN2Q9H000 416 aaKnown RBP16.96■□□□□ 0.31
CXCL1-201ENST00000395761 PRSS16Q9NQE7 514 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.96■□□□□ 0.31
CXCL1-201ENST00000395761 CWC15Q9P013 229 aaKnown RBP16.96■□□□□ 0.31
CXCL1-201ENST00000395761 VPS51Q9UID3 782 aa16.96■□□□□ 0.31
CXCL1-201ENST00000395761 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
CXCL1-201ENST00000395761 WASH4PA8MWX3 477 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 CBX4O00257 560 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 DCLK1O15075 740 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 PJA2O43164 708 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 ZMPSTE24O75844 475 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 VAV1P15498 845 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 MAN1A1P33908 653 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 HTR7P34969 479 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 GJC1P36383 396 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 ARHGAP25P42331 645 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 NOP2P46087 812 aaKnown RBP16.95■□□□□ 0.3
CXCL1-201ENST00000395761 COPAP53621 1224 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 CAMK2GQ13555 558 aaPredicted RBP16.95■□□□□ 0.3
CXCL1-201ENST00000395761 HNRNPA1L2Q32P51 320 aaKnown RBP16.95■□□□□ 0.3
CXCL1-201ENST00000395761 ZC3H14Q6PJT7 736 aaKnown RBP16.95■□□□□ 0.3
CXCL1-201ENST00000395761 TXLNBQ8N3L3 684 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 KDM1BQ8NB78 822 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 TEKT4Q8WW24 435 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 RLN3Q8WXF3 142 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 ARHGEF2Q92974 986 aaKnown RBP16.95■□□□□ 0.3
CXCL1-201ENST00000395761 MRGPRX1Q96LB2 322 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 CATSPERBQ9H7T0 1116 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 ATP13A1Q9HD20 1204 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 SUN2Q9UH99 717 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 LCMT1Q9UIC8 334 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 SALL4Q9UJQ4 1053 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 HYOU1Q9Y4L1 999 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 DUSP10Q9Y6W6 482 aa16.95■□□□□ 0.3
CXCL1-201ENST00000395761 K7ERQ8 282 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 FGF10O15520 208 aaPredicted RBP16.94■□□□□ 0.3
CXCL1-201ENST00000395761 DAPK3O43293 454 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 RAMP2O60895 175 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 SIN3BO75182 1162 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 CD48P09326 243 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 ERCC2P18074 760 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 AMPD1P23109 780 aa16.94■□□□□ 0.3
CXCL1-201ENST00000395761 HCAR3P49019 387 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms