RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 TSPAN16Q9UKR8 245 aa6.41□□□□□ -1.38
PTPN20-208ENST00000395727 USP18Q9UMW8 372 aa6.41□□□□□ -1.38
PTPN20-208ENST00000395727 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.41□□□□□ -1.38
PTPN20-208ENST00000395727 HBS1LQ9Y450 684 aaKnown RBP6.41□□□□□ -1.38
PTPN20-208ENST00000395727 GPR179Q6PRD1 2367 aa6.41□□□□□ -1.38
PTPN20-208ENST00000395727 EP300Q09472 2414 aaPredicted RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 MUC22E2RYF6 1773 aaPredicted RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 BCLAF3A2AJT9 711 aaKnown RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 GTPBP10A4D1E9 387 aaKnown RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 SGK1O00141 431 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 RHOBTB1O94844 696 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 FGFR1OPO95684 399 aaKnown RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 ZBED1O96006 694 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 CCDC192P0DO97 292 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 HNRNPLP14866 589 aaKnown RBP eCLIP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 NTSR1P30989 418 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 P2RY2P41231 377 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 SLC6A11P48066 632 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 YWHAGP61981 247 aaKnown RBP eCLIP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 SRSF5Q13243 272 aaKnown RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 CNGA2Q16280 664 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 CCDC40Q4G0X9 1142 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 USP39Q53GS9 565 aaKnown RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 C10orf120Q5SQS8 335 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 SLC6A19Q695T7 634 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 HEATR6Q6AI08 1181 aaKnown RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 GRAMD4Q6IC98 578 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 BEND5Q7L4P6 421 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 FAM214BQ7L5A3 538 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 ENOSF1Q7L5Y1 443 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 DGLUCYQ7Z3D6 616 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 TMEM25Q86YD3 366 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 ALLCQ8N6M5 410 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 ZNF513Q8N8E2 541 aaPredicted RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 ZNF557Q8N988 423 aaPredicted RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 MDGA1Q8NFP4 955 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 SLC35F5Q8WV83 523 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 NELFBQ8WX92 580 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 DDX1Q92499 740 aaKnown RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 HSFY1Q96LI6 401 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 BBS2Q9BXC9 721 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 TGIF2Q9GZN2 237 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 VPS45Q9NRW7 570 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 ABCC13Q9NSE7 274 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 STRIP2Q9ULQ0 834 aa6.4□□□□□ -1.38
PTPN20-208ENST00000395727 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 TNRC6BQ9UPQ9 1833 aaKnown RBP6.4□□□□□ -1.38
PTPN20-208ENST00000395727 SPTBN4Q9H254 2564 aa6.4□□□□□ -1.39
PTPN20-208ENST00000395727 NEDD8-MDP1E9PL57 170 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 FBXO21O94952 628 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 SLITRK5O94991 958 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 KLF8O95600 359 aaPredicted RBP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 TBX18O95935 607 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 IGLV3-27P01718 113 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 AFPP02771 609 aaKnown RBP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 KLKB1P03952 638 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 CISD3P0C7P0 127 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 TYRP14679 529 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 FOSL1P15407 271 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 HOXC13P31276 330 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 MPLP40238 635 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 PXNP49023 591 aaPredicted RBP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 TKTL1P51854 596 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 ATXN1P54253 815 aaKnown RBP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 DAOAP59103 153 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 KDSRQ06136 332 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 ADIGQ0VDE8 80 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 LPAL2Q16609 132 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 GOLGA7BQ2TAP0 167 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 ANO4Q32M45 955 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 CYP27C1Q4G0S4 372 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 C2orf27AQ580R0 203 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 C10orf76Q5T2E6 689 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 MPP7Q5T2T1 576 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 PRAMEF13Q5VWM6 474 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 FYB2Q5VWT5 728 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 CLEC17AQ6ZS10 378 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 SIX6OS1Q8N1H7 587 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 PPM1KQ8N3J5 372 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 MFSD2AQ8NA29 543 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 TXNDC5Q8NBS9 432 aaKnown RBP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 ERCC4Q92889 916 aaPredicted RBP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 NKD1Q969G9 470 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 AZIN2Q96A70 460 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 TRIM62Q9BVG3 475 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 ULBP1Q9BZM6 244 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 ARRDC1-AS1Q9H2J1 176 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 LRRC4Q9HBW1 653 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 DNAJC17Q9NVM6 304 aaKnown RBP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 CHMP5Q9NZZ3 219 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 MARCH2Q9P0N8 246 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 REV1Q9UBZ9 1251 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 EVLQ9UI08 416 aaPredicted RBP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 RWDD2AQ9UIY3 292 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 CTNND2Q9UQB3 1225 aa6.39□□□□□ -1.39
PTPN20-208ENST00000395727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPN20-208ENST00000395727 MYH10P35580 1976 aa6.38□□□□□ -1.39
PTPN20-208ENST00000395727 PTPRZ1P23471 2315 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms