RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CA9Q16790 459 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 DAB2IPQ5VWQ8 1189 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 CYP4V2Q6ZWL3 525 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 CEP68Q76N32 757 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 ZNF366Q8N895 744 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 OR7D4Q8NG98 312 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 GAB3Q8WWW8 586 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 RFFLQ8WZ73 363 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 NKD2Q969F2 451 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 MYO19Q96H55 970 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 BAG1Q99933 345 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 ZWILCHQ9H900 591 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 OSGEPQ9NPF4 335 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 NEU3Q9UQ49 428 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 PCDHA13Q9Y5I0 950 aa19.48■□□□□ 0.71
PDLIM7-204ENST00000393546 SOWAHDA6NJG2 315 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 WASH4PA8MWX3 477 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 EEF2KO00418 725 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 FGF10O15520 208 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 RPP40O75818 363 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 NDUFA10O95299 355 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 IL1R2P27930 398 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 PLA2G5P39877 138 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 ARHGAP25P42331 645 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 VASPP50552 380 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 SRSF5Q13243 272 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 CAMK2GQ13555 558 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 SIM2Q14190 667 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 MESDQ14696 234 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 HNRNPA1L2Q32P51 320 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 PPP6R3Q5H9R7 873 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 KCNT1Q5JUK3 1230 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 RTL3Q8N8U3 475 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 DCAF4L2Q8NA75 395 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 OR2T3Q8NH03 318 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 TEKT4Q8WW24 435 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 KCTD15Q96SI1 283 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 PSMB7Q99436 277 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 MAGEH1Q9H213 219 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 FBRSQ9HAH7 460 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 PRDM16Q9HAZ2 1276 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 NDFIP2Q9NV92 336 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 RAB23Q9ULC3 237 aa19.47■□□□□ 0.71
PDLIM7-204ENST00000393546 TARSL2A2RTX5 802 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 TTC34A8MYJ7 566 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 RAMP2O60895 175 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 MTA2O94776 668 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 LMNAP02545 664 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 RARAP10276 462 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 TCF4P15884 667 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 NDUFV2P19404 249 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 HCAR3P49019 387 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 STK19P49842 368 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 POLD3Q15054 466 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 TCEAL1Q15170 157 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 SMTNL2Q2TAL5 461 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 IL31Q6EBC2 164 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 PRR23BQ6ZRT6 265 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 TMPRSS6Q8IU80 811 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 HSPH1Q92598 858 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 MRGPRX1Q96LB2 322 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 EPC1Q9H2F5 836 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 ATP13A1Q9HD20 1204 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 PRSS16Q9NQE7 514 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 VPS51Q9UID3 782 aa19.46■□□□□ 0.71
PDLIM7-204ENST00000393546 EDDM13A0A1B0GTR0 161 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 GOLGA6L3A6NEY3 463 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 TMEM110-MUSTN1A8MSY1 372 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 CBX4O00257 560 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 SNAP91O60641 907 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 ZNF217O75362 1048 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 MAN1A1P33908 653 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 ARL4AP40617 200 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 NOP2P46087 812 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 GSDMDP57764 484 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 SLC25A11Q02978 314 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 SLC20A2Q08357 652 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 DPYSL2Q16555 572 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 ACCSLQ4AC99 568 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 RETSATQ6NUM9 610 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 KIAA1324Q6UXG2 1013 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 RFX8Q6ZV50 586 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 C11orf74Q86VG3 221 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 PRCCQ92733 491 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 ARHGEF2Q92974 986 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 SIPA1Q96FS4 1042 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 SPACA7Q96KW9 195 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 MKRN2Q9H000 416 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 HPCAL4Q9UM19 191 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 INVSQ9Y283 1065 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 CKAP5Q14008 2032 aa19.45■□□□□ 0.7
PDLIM7-204ENST00000393546 H3BRJ5 948 aa19.44■□□□□ 0.7
PDLIM7-204ENST00000393546 ATP9BO43861 1147 aa19.44■□□□□ 0.7
PDLIM7-204ENST00000393546 RNASEH1O60930 286 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-204ENST00000393546 SIN3BO75182 1162 aa19.44■□□□□ 0.7
PDLIM7-204ENST00000393546 GOT1P17174 413 aa19.44■□□□□ 0.7
PDLIM7-204ENST00000393546 ACVRL1P37023 503 aa19.44■□□□□ 0.7
PDLIM7-204ENST00000393546 P2RY2P41231 377 aa19.44■□□□□ 0.7
PDLIM7-204ENST00000393546 COPAP53621 1224 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms