RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 DGUOKQ16854 277 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 IRF2BP1Q8IU81 584 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 TMEM161BQ8NDZ6 487 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 OSBPL10Q9BXB5 764 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 TKTL2Q9H0I9 626 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 A0A087X1B8 175 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 PSMA3P25788 255 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 PIK3R1P27986 724 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 PBLDP30039 288 aaPredicted RBP13.34□□□□□ -0.27
LCA5-202ENST00000392959 GRK3P35626 688 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 MAPK10P53779 464 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 PURAQ00577 322 aaKnown RBP13.34□□□□□ -0.27
LCA5-202ENST00000392959 SPANXN2Q5MJ10 180 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 DHDDSQ86SQ9 333 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 TMEM139Q8IV31 216 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 C10orf53Q8N6V4 93 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 MKL1Q969V6 931 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 ULBP1Q9BZM6 244 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 NDEL1Q9GZM8 345 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 RNPEPQ9H4A4 650 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 RIBC2Q9H4K1 309 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 TMEM134Q9H6X4 195 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 ENOPH1Q9UHY7 261 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 SLC25A13Q9UJS0 675 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 ADAM30Q9UKF2 790 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 CRYL1Q9Y2S2 319 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 DIP2BQ9P265 1576 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 PIAS1O75925 651 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 COX4I1P13073 169 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 C4BPBP20851 252 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 EIF2B2P49770 351 aaKnown RBP13.34□□□□□ -0.27
LCA5-202ENST00000392959 BFSP2Q13515 415 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 STARD3Q14849 445 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 TRABD2AQ86V40 505 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 PHF13Q86YI8 300 aaPredicted RBP13.34□□□□□ -0.27
LCA5-202ENST00000392959 HGH1Q9BTY7 390 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 HOXA2O43364 376 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 EDF1O60869 148 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 ALDH1A2O94788 518 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 POMCP01189 267 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 FGFR3P22607 806 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 S100A3P33764 101 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 ELAVL2Q12926 359 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 TAF5Q15542 800 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 PCID2Q5JVF3 399 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 DNAJB3Q8WWF6 145 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 HMG20AQ9NP66 347 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 KLHL28Q9NXS3 571 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 KLHL20Q9Y2M5 609 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 PCDHB5Q9Y5E4 795 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 CLTCQ00610 1675 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 NKRFO15226 690 aaKnown RBP eCLIP13.33□□□□□ -0.28
LCA5-202ENST00000392959 ALOX15BO15296 676 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 HDAC3O15379 428 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 STAU1O95793 577 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 ATP6V1C1P21283 382 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 ST13P50502 369 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 CNTN2Q02246 1040 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 MARK2Q7KZI7 788 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 FNIP1Q8TF40 1166 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 SNRNP25Q9BV90 132 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 PACSIN3Q9UKS6 424 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 RGSL1A5PLK6 1076 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 ASNA1O43681 348 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 ZMPSTE24O75844 475 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 PGM3O95394 542 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 ANPEPP15144 967 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 ATP5F1P24539 256 aaPredicted RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 RPL5P46777 297 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 HK2P52789 917 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 RPL7AP62424 266 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 NOMO3P69849 1222 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 EPS8Q12929 822 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 PDK3Q15120 406 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 SWT1Q5T5J6 900 aaKnown RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 SDE2Q6IQ49 451 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 UCMAQ8WVF2 138 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 FHDC1Q9C0D6 1143 aaPredicted RBP13.33□□□□□ -0.28
LCA5-202ENST00000392959 ELOVL4Q9GZR5 314 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 ADAM28Q9UKQ2 775 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 DIP2CQ9Y2E4 1556 aa13.33□□□□□ -0.28
LCA5-202ENST00000392959 hCG_1818297A0A087WSY0 165 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 PIPSLA2A3N6 862 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 ABCB1P08183 1280 aaPredicted RBP13.32□□□□□ -0.28
LCA5-202ENST00000392959 CCDC130P13994 396 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 CYP2A7P20853 494 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 GRIA3P42263 894 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 PSME3P61289 254 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 GSTA3Q16772 222 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 ZACNQ401N2 412 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 GLT6D1Q7Z4J2 308 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 VSIG10LQ86VR7 867 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 UNC93AQ86WB7 457 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 TRIM48Q8IWZ4 208 aa13.32□□□□□ -0.28
LCA5-202ENST00000392959 TMEM132CQ8N3T6 1108 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms