RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 C3orf70A6NLC5 250 aaPredicted RBP15.29■□□□□ 0.04
SUMO1-203ENST00000392246 DCLK1O15075 740 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 NPC1O15118 1278 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 ASLP04424 464 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 HNRNPLP14866 589 aaKnown RBP eCLIP15.29■□□□□ 0.04
SUMO1-203ENST00000392246 TIE1P35590 1138 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 MARCKSL1P49006 195 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 PEX5P50542 639 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 NDST2P52849 883 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 C2orf27AQ580R0 203 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 EMC10Q5UCC4 262 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 TMCO3Q6UWJ1 677 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 UBL4BQ8N7F7 174 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 ZNF513Q8N8E2 541 aaPredicted RBP15.29■□□□□ 0.04
SUMO1-203ENST00000392246 EXD1Q8NHP7 514 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 USP33Q8TEY7 942 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 ARHGEF2Q92974 986 aaKnown RBP15.29■□□□□ 0.04
SUMO1-203ENST00000392246 IER2Q9BTL4 223 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 C2orf49Q9BVC5 232 aaPredicted RBP15.29■□□□□ 0.04
SUMO1-203ENST00000392246 MAK16Q9BXY0 300 aaKnown RBP15.29■□□□□ 0.04
SUMO1-203ENST00000392246 CHRDQ9H2X0 955 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 PRDM16Q9HAZ2 1276 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 C11orf16Q9NQ32 467 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 PLA2G4CQ9UP65 541 aa15.29■□□□□ 0.04
SUMO1-203ENST00000392246 PRR33A8MZF0 331 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 ATG13O75143 517 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 DLDP09622 509 aaKnown RBP15.28■□□□□ 0.04
SUMO1-203ENST00000392246 RWDD2BP57060 319 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 ECT2LQ008S8 904 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 PARP15Q460N3 678 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 HSF5Q4G112 596 aaPredicted RBP15.28■□□□□ 0.04
SUMO1-203ENST00000392246 TMEM31Q5JXX7 168 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 IL31Q6EBC2 164 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 MFSD7Q6UXD7 560 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 TRMT11Q7Z4G4 463 aaKnown RBP15.28■□□□□ 0.04
SUMO1-203ENST00000392246 DCAF4L2Q8NA75 395 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 OR7D4Q8NG98 312 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 RPLP0P6Q8NHW5 317 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 PCDH19Q8TAB3 1148 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 SORCS1Q8WY21 1168 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 ACDQ96AP0 544 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 HES6Q96HZ4 224 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 RBM41Q96IZ5 413 aaKnown RBP15.28■□□□□ 0.04
SUMO1-203ENST00000392246 RNF157Q96PX1 679 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 SPON2Q9BUD6 331 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 NOL6Q9H6R4 1146 aaKnown RBP15.28■□□□□ 0.04
SUMO1-203ENST00000392246 ATP13A1Q9HD20 1204 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 DLGAP2Q9P1A6 1054 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 THAP10Q9P2Z0 257 aaPredicted RBP15.28■□□□□ 0.04
SUMO1-203ENST00000392246 HCN2Q9UL51 889 aa15.28■□□□□ 0.04
SUMO1-203ENST00000392246 PACSIN2Q9UNF0 486 aaPredicted RBP15.28■□□□□ 0.04
SUMO1-203ENST00000392246 ANTXRLA6NF34 631 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 CHURC1-FNTBB4DL54 471 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 RASA4BC9J798 803 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 RASA4O43374 803 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 CHRM1P11229 460 aaPredicted RBP15.27■□□□□ 0.04
SUMO1-203ENST00000392246 SERPINB6P35237 376 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 CDKN2BP42772 138 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 COPS2P61201 443 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 TFDP3Q5H9I0 405 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 MEI1Q5TIA1 1274 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 EGFLAMQ63HQ2 1017 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 Q6ZS52 159 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 CCDC50Q8IVM0 306 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.27■□□□□ 0.04
SUMO1-203ENST00000392246 CYB5D2Q8WUJ1 264 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 PSMB7Q99436 277 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 ACE2Q9BYF1 805 aaPredicted RBP15.27■□□□□ 0.04
SUMO1-203ENST00000392246 KLC2Q9H0B6 622 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 LRRC19Q9H756 370 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 ETNK2Q9NVF9 386 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 HPCAL4Q9UM19 191 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 ERVW-1Q9UQF0 538 aa15.27■□□□□ 0.04
SUMO1-203ENST00000392246 ARHGAP42A6NI28 874 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 USP27XA6NNY8 438 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 DDX3YO15523 660 aaKnown RBP15.27■□□□□ 0.03
SUMO1-203ENST00000392246 KIF5CO60282 957 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 SRPRAP08240 638 aaKnown RBP15.27■□□□□ 0.03
SUMO1-203ENST00000392246 ACVRL1P37023 503 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 NNMTP40261 264 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 CETN2P41208 172 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 NUMBP49757 651 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 ST8SIA6P61647 398 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 GAS6Q14393 721 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 ZNF234Q14588 700 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 TAZQ16635 292 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 PTPRNQ16849 979 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 HS1BP3Q53T59 392 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 AFMIDQ63HM1 303 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 SDE2Q6IQ49 451 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 SPOCD1Q6ZMY3 1216 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 RFX6Q8HWS3 928 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 CHPFQ8IZ52 775 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 SPEM1Q8N4L4 309 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 ALLCQ8N6M5 410 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 NPWQ8N729 165 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 PQLC3Q8N755 202 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 TMEM105Q8N8V8 129 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 IL17RCQ8NAC3 791 aa15.27■□□□□ 0.03
SUMO1-203ENST00000392246 TXNDC5Q8NBS9 432 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms