RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 RPS14P62263 151 aaKnown RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 RPL7AP62424 266 aaKnown RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 MAMLD1Q13495 774 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 ELAVL3Q14576 367 aaKnown RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 PEAR1Q5VY43 1037 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 SLFN11Q7Z7L1 901 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 SYT12Q8IV01 421 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 DRC7Q8IY82 874 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 TMEFF1Q8IYR6 380 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 ZNF366Q8N895 744 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 CADM4Q8NFZ8 388 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 TBC1D31Q96DN5 1066 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 EIF3CQ99613 913 aaKnown RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 EVLQ9UI08 416 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 CDV3Q9UKY7 258 aaKnown RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 SNX10Q9Y5X0 201 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 ATP9BO43861 1147 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 SIN3BO75182 1162 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 PSMA2P25787 234 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 HNRNPH3P31942 346 aaKnown RBP13□□□□□ -0.33
GGPS1-203ENST00000391855 L1CAMP32004 1257 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 ID4P47928 161 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 LIMK1P53667 647 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 ZNF33AQ06730 810 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 PUM1Q14671 1186 aaKnown RBP eCLIP13□□□□□ -0.33
GGPS1-203ENST00000391855 AASDHQ4L235 1098 aaPredicted RBP13□□□□□ -0.33
GGPS1-203ENST00000391855 WDR45BQ5MNZ6 344 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 SYCP2LQ5T4T6 812 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 SH3PXD2AQ5TCZ1 1133 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 RETSATQ6NUM9 610 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 USP30Q70CQ3 517 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 TMC6Q7Z403 805 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 TFAP2DQ7Z6R9 452 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 DSG4Q86SJ6 1040 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 CCDC185Q8N715 623 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 FRMD1Q8N878 549 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 RNF214Q8ND24 703 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 CEP76Q8TAP6 659 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 CPLX3Q8WVH0 158 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 PIGKQ92643 395 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 ERLEC1Q96DZ1 483 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 TOE1Q96GM8 510 aaKnown RBP13□□□□□ -0.33
GGPS1-203ENST00000391855 ZNF419Q96HQ0 510 aaPredicted RBP13□□□□□ -0.33
GGPS1-203ENST00000391855 CCDC114Q96M63 670 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 EPAS1Q99814 870 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
GGPS1-203ENST00000391855 DONSONQ9NYP3 566 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 MPP6Q9NZW5 540 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 ZNF212Q9UDV6 495 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 SUSD2Q9UGT4 822 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 ADAMTS1Q9UHI8 967 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 HS3ST2Q9Y278 367 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 NCKAP1Q9Y2A7 1128 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 MYO15AQ9UKN7 3530 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 VPS13AQ96RL7 3174 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 RALGAPA1Q6GYQ0 2036 aa13□□□□□ -0.33
GGPS1-203ENST00000391855 TMEM191CA6NGB0 347 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 TTC34A8MYJ7 566 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 KHNYNO15037 678 aaKnown RBP12.99□□□□□ -0.33
GGPS1-203ENST00000391855 ALOX15BO15296 676 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 RNF8O76064 485 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 LRIG2O94898 1065 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 ADH1BP00325 375 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 PLEKP08567 350 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-203ENST00000391855 CASP14P31944 242 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 PTGER3P43115 390 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 STK19P49842 368 aaPredicted RBP12.99□□□□□ -0.33
GGPS1-203ENST00000391855 SLC20A2Q08357 652 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 CST6Q15828 149 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 TSR1Q2NL82 804 aaKnown RBP12.99□□□□□ -0.33
GGPS1-203ENST00000391855 C9orf64Q5T6V5 341 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 SCYL2Q6P3W7 929 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 ARMCX6Q7L4S7 300 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 OR52K2Q8NGK3 314 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 OR8D1Q8WZ84 308 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 RPL10LQ96L21 214 aaKnown RBP12.99□□□□□ -0.33
GGPS1-203ENST00000391855 HSPA12BQ96MM6 686 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 PABPC3Q9H361 631 aaKnown RBP12.99□□□□□ -0.33
GGPS1-203ENST00000391855 SGK2Q9HBY8 427 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 TMEM248Q9NWD8 314 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 DLL3Q9NYJ7 618 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 SLCO3A1Q9UIG8 710 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 PILRBQ9UKJ0 227 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.99□□□□□ -0.33
GGPS1-203ENST00000391855 DOCK4Q8N1I0 1966 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 TNRC6BQ9UPQ9 1833 aaKnown RBP12.99□□□□□ -0.33
GGPS1-203ENST00000391855 NUP205Q92621 2012 aa12.99□□□□□ -0.33
GGPS1-203ENST00000391855 USP34Q70CQ2 3546 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 NYNRINQ9P2P1 1898 aaKnown RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 MEI4A8MW99 385 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 FGF10O15520 208 aaPredicted RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 ATMINO43313 823 aaPredicted RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 ZNF135P52742 658 aaPredicted RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 GEMIN4P57678 1058 aaKnown RBP12.98□□□□□ -0.33
GGPS1-203ENST00000391855 OGDHQ02218 1023 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 GNA12Q03113 381 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 ACAP1Q15027 740 aa12.98□□□□□ -0.33
GGPS1-203ENST00000391855 SF3A2Q15428 464 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms